Gene : Medtr2g039530 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR31707:SF10 - PECTINESTERASE/PECTINESTERASE INHIBITOR 32-RELATED Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  2380 Name:  ? Medtr2g039530
Secondary Identifier:  ? PAC:31066974
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g039530 0.5kb upstream 0.5kb upstream 1676 true chr2: 17321429-17323104 Medicago truncatula
Medtr2g039530 0.5kb upstream 0.5kb upstream 500 false chr2: 17321429-17321928 Medicago truncatula
Medtr2g039530 0.5kb downstream 0.5kb downstream 1676 true chr2: 17321929-17323604 Medicago truncatula
Medtr2g039530 0.5kb downstream 0.5kb downstream 500 false chr2: 17323105-17323604 Medicago truncatula
Medtr2g039530 1.0kb upstream 1.0kb upstream 2176 true chr2: 17320929-17323104 Medicago truncatula
Medtr2g039530 1.0kb upstream 1.0kb upstream 1000 false chr2: 17320929-17321928 Medicago truncatula
Medtr2g039530 1.0kb downstream 1.0kb downstream 2176 true chr2: 17321929-17324104 Medicago truncatula
Medtr2g039530 1.0kb downstream 1.0kb downstream 1000 false chr2: 17323105-17324104 Medicago truncatula
Medtr2g039530 2.0kb upstream 2.0kb upstream 3176 true chr2: 17319929-17323104 Medicago truncatula
Medtr2g039530 2.0kb upstream 2.0kb upstream 2000 false chr2: 17319929-17321928 Medicago truncatula
Medtr2g039530 2.0kb downstream 2.0kb downstream 3176 true chr2: 17321929-17325104 Medicago truncatula
Medtr2g039530 2.0kb downstream 2.0kb downstream 2000 false chr2: 17323105-17325104 Medicago truncatula
Medtr2g039530 5.0kb upstream 5.0kb upstream 6176 true chr2: 17316929-17323104 Medicago truncatula
Medtr2g039530 5.0kb upstream 5.0kb upstream 5000 false chr2: 17316929-17321928 Medicago truncatula
Medtr2g039530 5.0kb downstream 5.0kb downstream 6176 true chr2: 17321929-17328104 Medicago truncatula
Medtr2g039530 5.0kb downstream 5.0kb downstream 5000 false chr2: 17323105-17328104 Medicago truncatula
Medtr2g039530 10.0kb upstream 10.0kb upstream 11176 true chr2: 17311929-17323104 Medicago truncatula
Medtr2g039530 10.0kb upstream 10.0kb upstream 10000 false chr2: 17311929-17321928 Medicago truncatula
Medtr2g039530 10.0kb downstream 10.0kb downstream 11176 true chr2: 17321929-17333104 Medicago truncatula
Medtr2g039530 10.0kb downstream 10.0kb downstream 10000 false chr2: 17323105-17333104 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316437 5265 Fabidae View MSA
124040659 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain