Gene : Medtr2g039960 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED Description:  DEAD-box ATP-dependent RNA helicase
Genomic Order:  2412 Name:  ? Medtr2g039960
Secondary Identifier:  ? PAC:31068942
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g039960 0.5kb upstream 0.5kb upstream 4666 true chr2: 17532829-17537494 Medicago truncatula
Medtr2g039960 0.5kb upstream 0.5kb upstream 500 false chr2: 17536995-17537494 Medicago truncatula
Medtr2g039960 0.5kb downstream 0.5kb downstream 4666 true chr2: 17532329-17536994 Medicago truncatula
Medtr2g039960 0.5kb downstream 0.5kb downstream 500 false chr2: 17532329-17532828 Medicago truncatula
Medtr2g039960 1.0kb upstream 1.0kb upstream 5166 true chr2: 17532829-17537994 Medicago truncatula
Medtr2g039960 1.0kb upstream 1.0kb upstream 1000 false chr2: 17536995-17537994 Medicago truncatula
Medtr2g039960 1.0kb downstream 1.0kb downstream 5166 true chr2: 17531829-17536994 Medicago truncatula
Medtr2g039960 1.0kb downstream 1.0kb downstream 1000 false chr2: 17531829-17532828 Medicago truncatula
Medtr2g039960 2.0kb upstream 2.0kb upstream 6166 true chr2: 17532829-17538994 Medicago truncatula
Medtr2g039960 2.0kb upstream 2.0kb upstream 2000 false chr2: 17536995-17538994 Medicago truncatula
Medtr2g039960 2.0kb downstream 2.0kb downstream 6166 true chr2: 17530829-17536994 Medicago truncatula
Medtr2g039960 2.0kb downstream 2.0kb downstream 2000 false chr2: 17530829-17532828 Medicago truncatula
Medtr2g039960 5.0kb upstream 5.0kb upstream 9166 true chr2: 17532829-17541994 Medicago truncatula
Medtr2g039960 5.0kb upstream 5.0kb upstream 5000 false chr2: 17536995-17541994 Medicago truncatula
Medtr2g039960 5.0kb downstream 5.0kb downstream 9166 true chr2: 17527829-17536994 Medicago truncatula
Medtr2g039960 5.0kb downstream 5.0kb downstream 5000 false chr2: 17527829-17532828 Medicago truncatula
Medtr2g039960 10.0kb upstream 10.0kb upstream 14166 true chr2: 17532829-17546994 Medicago truncatula
Medtr2g039960 10.0kb upstream 10.0kb upstream 10000 false chr2: 17536995-17546994 Medicago truncatula
Medtr2g039960 10.0kb downstream 10.0kb downstream 14166 true chr2: 17522829-17536994 Medicago truncatula
Medtr2g039960 10.0kb downstream 10.0kb downstream 10000 false chr2: 17522829-17532828 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.296     High  
cufflinks 65.751     High  
cufflinks 43.086     High  
cufflinks 105.775     High High
cufflinks 57.121     High  
cufflinks 31.206     High Low
cufflinks 44.105     High  
cufflinks 46.122     High  
cufflinks 70.971     High  

0 Strain