Gene : Medtr2g041270 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A Description:  replication protein A 70 kDa protein
Genomic Order:  2492 Name:  ? Medtr2g041270
Secondary Identifier:  ? PAC:31068188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g041270 0.5kb upstream 0.5kb upstream 5005 true chr2: 18100698-18105702 Medicago truncatula
Medtr2g041270 0.5kb upstream 0.5kb upstream 500 false chr2: 18105203-18105702 Medicago truncatula
Medtr2g041270 0.5kb downstream 0.5kb downstream 5005 true chr2: 18100198-18105202 Medicago truncatula
Medtr2g041270 0.5kb downstream 0.5kb downstream 500 false chr2: 18100198-18100697 Medicago truncatula
Medtr2g041270 1.0kb upstream 1.0kb upstream 5505 true chr2: 18100698-18106202 Medicago truncatula
Medtr2g041270 1.0kb upstream 1.0kb upstream 1000 false chr2: 18105203-18106202 Medicago truncatula
Medtr2g041270 1.0kb downstream 1.0kb downstream 5505 true chr2: 18099698-18105202 Medicago truncatula
Medtr2g041270 1.0kb downstream 1.0kb downstream 1000 false chr2: 18099698-18100697 Medicago truncatula
Medtr2g041270 2.0kb upstream 2.0kb upstream 6505 true chr2: 18100698-18107202 Medicago truncatula
Medtr2g041270 2.0kb upstream 2.0kb upstream 2000 false chr2: 18105203-18107202 Medicago truncatula
Medtr2g041270 2.0kb downstream 2.0kb downstream 6505 true chr2: 18098698-18105202 Medicago truncatula
Medtr2g041270 2.0kb downstream 2.0kb downstream 2000 false chr2: 18098698-18100697 Medicago truncatula
Medtr2g041270 5.0kb upstream 5.0kb upstream 9505 true chr2: 18100698-18110202 Medicago truncatula
Medtr2g041270 5.0kb upstream 5.0kb upstream 5000 false chr2: 18105203-18110202 Medicago truncatula
Medtr2g041270 5.0kb downstream 5.0kb downstream 9505 true chr2: 18095698-18105202 Medicago truncatula
Medtr2g041270 5.0kb downstream 5.0kb downstream 5000 false chr2: 18095698-18100697 Medicago truncatula
Medtr2g041270 10.0kb upstream 10.0kb upstream 14505 true chr2: 18100698-18115202 Medicago truncatula
Medtr2g041270 10.0kb upstream 10.0kb upstream 10000 false chr2: 18105203-18115202 Medicago truncatula
Medtr2g041270 10.0kb downstream 10.0kb downstream 14505 true chr2: 18090698-18105202 Medicago truncatula
Medtr2g041270 10.0kb downstream 10.0kb downstream 10000 false chr2: 18090698-18100697 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299681 5265 Fabidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.97        
cufflinks 3.641        
cufflinks 3.178        
cufflinks 0.957       Low
cufflinks 5.448       High
cufflinks 0.597       Low
cufflinks 1.886        
cufflinks 2.764        
cufflinks 2.835        

0 Strain