Gene : Medtr2g030170 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR12632 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED Description:  CCAAT-binding transcription factor
Genomic Order:  1598 Name:  ? Medtr2g030170
Secondary Identifier:  ? PAC:31063451
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g030170 0.5kb upstream 0.5kb upstream 8011 true chr2: 11302693-11310703 Medicago truncatula
Medtr2g030170 0.5kb upstream 0.5kb upstream 500 false chr2: 11310204-11310703 Medicago truncatula
Medtr2g030170 0.5kb downstream 0.5kb downstream 8011 true chr2: 11302193-11310203 Medicago truncatula
Medtr2g030170 0.5kb downstream 0.5kb downstream 500 false chr2: 11302193-11302692 Medicago truncatula
Medtr2g030170 1.0kb upstream 1.0kb upstream 8511 true chr2: 11302693-11311203 Medicago truncatula
Medtr2g030170 1.0kb upstream 1.0kb upstream 1000 false chr2: 11310204-11311203 Medicago truncatula
Medtr2g030170 1.0kb downstream 1.0kb downstream 8511 true chr2: 11301693-11310203 Medicago truncatula
Medtr2g030170 1.0kb downstream 1.0kb downstream 1000 false chr2: 11301693-11302692 Medicago truncatula
Medtr2g030170 2.0kb upstream 2.0kb upstream 9511 true chr2: 11302693-11312203 Medicago truncatula
Medtr2g030170 2.0kb upstream 2.0kb upstream 2000 false chr2: 11310204-11312203 Medicago truncatula
Medtr2g030170 2.0kb downstream 2.0kb downstream 9511 true chr2: 11300693-11310203 Medicago truncatula
Medtr2g030170 2.0kb downstream 2.0kb downstream 2000 false chr2: 11300693-11302692 Medicago truncatula
Medtr2g030170 5.0kb upstream 5.0kb upstream 12511 true chr2: 11302693-11315203 Medicago truncatula
Medtr2g030170 5.0kb upstream 5.0kb upstream 5000 false chr2: 11310204-11315203 Medicago truncatula
Medtr2g030170 5.0kb downstream 5.0kb downstream 12511 true chr2: 11297693-11310203 Medicago truncatula
Medtr2g030170 5.0kb downstream 5.0kb downstream 5000 false chr2: 11297693-11302692 Medicago truncatula
Medtr2g030170 10.0kb upstream 10.0kb upstream 17511 true chr2: 11302693-11320203 Medicago truncatula
Medtr2g030170 10.0kb upstream 10.0kb upstream 10000 false chr2: 11310204-11320203 Medicago truncatula
Medtr2g030170 10.0kb downstream 10.0kb downstream 17511 true chr2: 11292693-11310203 Medicago truncatula
Medtr2g030170 10.0kb downstream 10.0kb downstream 10000 false chr2: 11292693-11302692 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309024 5265 Fabidae View MSA
124071541 5270 Rosid View MSA
123747394 5271 Pentapetalae View MSA
122791430 5272 Eudicot View MSA
122049545 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.541        
cufflinks 1.801        
cufflinks 1.743        
cufflinks 0.383        
cufflinks 2.276       High
cufflinks 0.173       Low
cufflinks 0.464        
cufflinks 1.315        
cufflinks 0.541        

0 Strain