Gene : Medtr2g029450 M. truncatula Mt4.0v1
Defline:  (1 of 4) 4.1.1.25//4.1.1.28 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase // Aromatic-L-amino-acid decarboxylase / Tryptophan decarboxylase Description:  tyrosine/DOPA decarboxylase
Genomic Order:  1564 Name:  ? Medtr2g029450
Secondary Identifier:  ? PAC:31064906
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6030 Medicago truncatula pathologic  
Mtruncatula PWY-6802 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g029450 0.5kb upstream 0.5kb upstream 2075 true chr2: 11013862-11015936 Medicago truncatula
Medtr2g029450 0.5kb upstream 0.5kb upstream 500 false chr2: 11013862-11014361 Medicago truncatula
Medtr2g029450 0.5kb downstream 0.5kb downstream 2075 true chr2: 11014362-11016436 Medicago truncatula
Medtr2g029450 0.5kb downstream 0.5kb downstream 500 false chr2: 11015937-11016436 Medicago truncatula
Medtr2g029450 1.0kb upstream 1.0kb upstream 2575 true chr2: 11013362-11015936 Medicago truncatula
Medtr2g029450 1.0kb upstream 1.0kb upstream 1000 false chr2: 11013362-11014361 Medicago truncatula
Medtr2g029450 1.0kb downstream 1.0kb downstream 2575 true chr2: 11014362-11016936 Medicago truncatula
Medtr2g029450 1.0kb downstream 1.0kb downstream 1000 false chr2: 11015937-11016936 Medicago truncatula
Medtr2g029450 2.0kb upstream 2.0kb upstream 3575 true chr2: 11012362-11015936 Medicago truncatula
Medtr2g029450 2.0kb upstream 2.0kb upstream 2000 false chr2: 11012362-11014361 Medicago truncatula
Medtr2g029450 2.0kb downstream 2.0kb downstream 3575 true chr2: 11014362-11017936 Medicago truncatula
Medtr2g029450 2.0kb downstream 2.0kb downstream 2000 false chr2: 11015937-11017936 Medicago truncatula
Medtr2g029450 5.0kb upstream 5.0kb upstream 6575 true chr2: 11009362-11015936 Medicago truncatula
Medtr2g029450 5.0kb upstream 5.0kb upstream 5000 false chr2: 11009362-11014361 Medicago truncatula
Medtr2g029450 5.0kb downstream 5.0kb downstream 6575 true chr2: 11014362-11020936 Medicago truncatula
Medtr2g029450 5.0kb downstream 5.0kb downstream 5000 false chr2: 11015937-11020936 Medicago truncatula
Medtr2g029450 10.0kb upstream 10.0kb upstream 11575 true chr2: 11004362-11015936 Medicago truncatula
Medtr2g029450 10.0kb upstream 10.0kb upstream 10000 false chr2: 11004362-11014361 Medicago truncatula
Medtr2g029450 10.0kb downstream 10.0kb downstream 11575 true chr2: 11014362-11025936 Medicago truncatula
Medtr2g029450 10.0kb downstream 10.0kb downstream 10000 false chr2: 11015937-11025936 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313408 5265 Fabidae View MSA
124071819 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.888       High
cufflinks 0.224       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.63        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.316        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain