Gene : Medtr2g030450 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12096 - NUCLEAR PROTEIN SKIP-RELATED Description:  GAMYB-binding protein
Genomic Order:  1619 Name:  ? Medtr2g030450
Secondary Identifier:  ? PAC:31068695
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g030450 0.5kb upstream 0.5kb upstream 3111 true chr2: 11453867-11456977 Medicago truncatula
Medtr2g030450 0.5kb upstream 0.5kb upstream 500 false chr2: 11456478-11456977 Medicago truncatula
Medtr2g030450 0.5kb downstream 0.5kb downstream 3111 true chr2: 11453367-11456477 Medicago truncatula
Medtr2g030450 0.5kb downstream 0.5kb downstream 500 false chr2: 11453367-11453866 Medicago truncatula
Medtr2g030450 1.0kb upstream 1.0kb upstream 3611 true chr2: 11453867-11457477 Medicago truncatula
Medtr2g030450 1.0kb upstream 1.0kb upstream 1000 false chr2: 11456478-11457477 Medicago truncatula
Medtr2g030450 1.0kb downstream 1.0kb downstream 3611 true chr2: 11452867-11456477 Medicago truncatula
Medtr2g030450 1.0kb downstream 1.0kb downstream 1000 false chr2: 11452867-11453866 Medicago truncatula
Medtr2g030450 2.0kb upstream 2.0kb upstream 4611 true chr2: 11453867-11458477 Medicago truncatula
Medtr2g030450 2.0kb upstream 2.0kb upstream 2000 false chr2: 11456478-11458477 Medicago truncatula
Medtr2g030450 2.0kb downstream 2.0kb downstream 4611 true chr2: 11451867-11456477 Medicago truncatula
Medtr2g030450 2.0kb downstream 2.0kb downstream 2000 false chr2: 11451867-11453866 Medicago truncatula
Medtr2g030450 5.0kb upstream 5.0kb upstream 7611 true chr2: 11453867-11461477 Medicago truncatula
Medtr2g030450 5.0kb upstream 5.0kb upstream 5000 false chr2: 11456478-11461477 Medicago truncatula
Medtr2g030450 5.0kb downstream 5.0kb downstream 7611 true chr2: 11448867-11456477 Medicago truncatula
Medtr2g030450 5.0kb downstream 5.0kb downstream 5000 false chr2: 11448867-11453866 Medicago truncatula
Medtr2g030450 10.0kb upstream 10.0kb upstream 12611 true chr2: 11453867-11466477 Medicago truncatula
Medtr2g030450 10.0kb upstream 10.0kb upstream 10000 false chr2: 11456478-11466477 Medicago truncatula
Medtr2g030450 10.0kb downstream 10.0kb downstream 12611 true chr2: 11443867-11456477 Medicago truncatula
Medtr2g030450 10.0kb downstream 10.0kb downstream 10000 false chr2: 11443867-11453866 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298995 5265 Fabidae View MSA
124064188 5270 Rosid View MSA
123746163 5271 Pentapetalae View MSA
122796652 5272 Eudicot View MSA
122045671 5273 Angiosperm View MSA
121346165 5274 Embryophyte View MSA
123425869 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.616     High High
cufflinks 49.695     High  
cufflinks 64.183     High  
cufflinks 67.664     High High
cufflinks 51.227     High  
cufflinks 43.406     High Low
cufflinks 55.686     High  
cufflinks 54.059     High  
cufflinks 63.995     High  

0 Strain