Gene : Medtr2g031620 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2373 - Predicted mitochondrial DNA helicase twinkle Description:  toprim domain protein
Genomic Order:  1678 Name:  ? Medtr2g031620
Secondary Identifier:  ? PAC:31069245
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g031620 0.5kb upstream 0.5kb upstream 12883 true chr2: 11960338-11973220 Medicago truncatula
Medtr2g031620 0.5kb upstream 0.5kb upstream 500 false chr2: 11972721-11973220 Medicago truncatula
Medtr2g031620 0.5kb downstream 0.5kb downstream 12883 true chr2: 11959838-11972720 Medicago truncatula
Medtr2g031620 0.5kb downstream 0.5kb downstream 500 false chr2: 11959838-11960337 Medicago truncatula
Medtr2g031620 1.0kb upstream 1.0kb upstream 13383 true chr2: 11960338-11973720 Medicago truncatula
Medtr2g031620 1.0kb upstream 1.0kb upstream 1000 false chr2: 11972721-11973720 Medicago truncatula
Medtr2g031620 1.0kb downstream 1.0kb downstream 13383 true chr2: 11959338-11972720 Medicago truncatula
Medtr2g031620 1.0kb downstream 1.0kb downstream 1000 false chr2: 11959338-11960337 Medicago truncatula
Medtr2g031620 2.0kb upstream 2.0kb upstream 14383 true chr2: 11960338-11974720 Medicago truncatula
Medtr2g031620 2.0kb upstream 2.0kb upstream 2000 false chr2: 11972721-11974720 Medicago truncatula
Medtr2g031620 2.0kb downstream 2.0kb downstream 14383 true chr2: 11958338-11972720 Medicago truncatula
Medtr2g031620 2.0kb downstream 2.0kb downstream 2000 false chr2: 11958338-11960337 Medicago truncatula
Medtr2g031620 5.0kb upstream 5.0kb upstream 17383 true chr2: 11960338-11977720 Medicago truncatula
Medtr2g031620 5.0kb upstream 5.0kb upstream 5000 false chr2: 11972721-11977720 Medicago truncatula
Medtr2g031620 5.0kb downstream 5.0kb downstream 17383 true chr2: 11955338-11972720 Medicago truncatula
Medtr2g031620 5.0kb downstream 5.0kb downstream 5000 false chr2: 11955338-11960337 Medicago truncatula
Medtr2g031620 10.0kb upstream 10.0kb upstream 22383 true chr2: 11960338-11982720 Medicago truncatula
Medtr2g031620 10.0kb upstream 10.0kb upstream 10000 false chr2: 11972721-11982720 Medicago truncatula
Medtr2g031620 10.0kb downstream 10.0kb downstream 22383 true chr2: 11950338-11972720 Medicago truncatula
Medtr2g031620 10.0kb downstream 10.0kb downstream 10000 false chr2: 11950338-11960337 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304688 5265 Fabidae View MSA
124064761 5270 Rosid View MSA
123739173 5271 Pentapetalae View MSA
122792850 5272 Eudicot View MSA
122043908 5273 Angiosperm View MSA
121344607 5274 Embryophyte View MSA
123424427 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.19        
cufflinks 1.702        
cufflinks 2.51        
cufflinks 0.288       Low
cufflinks 3.262       High
cufflinks 0.136     Low Low
cufflinks 0.912        
cufflinks 2.089        
cufflinks 0.695        

0 Strain