Gene : Medtr2g035100 M. truncatula Mt4.0v1
Defline:  (1 of 36) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Description:  disease-resistance response protein
Genomic Order:  1879 Name:  ? Medtr2g035100
Secondary Identifier:  ? PAC:31065156
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g035100 0.5kb upstream 0.5kb upstream 2803 true chr2: 13483415-13486217 Medicago truncatula
Medtr2g035100 0.5kb upstream 0.5kb upstream 500 false chr2: 13483415-13483914 Medicago truncatula
Medtr2g035100 0.5kb downstream 0.5kb downstream 2803 true chr2: 13483915-13486717 Medicago truncatula
Medtr2g035100 0.5kb downstream 0.5kb downstream 500 false chr2: 13486218-13486717 Medicago truncatula
Medtr2g035100 1.0kb upstream 1.0kb upstream 3303 true chr2: 13482915-13486217 Medicago truncatula
Medtr2g035100 1.0kb upstream 1.0kb upstream 1000 false chr2: 13482915-13483914 Medicago truncatula
Medtr2g035100 1.0kb downstream 1.0kb downstream 3303 true chr2: 13483915-13487217 Medicago truncatula
Medtr2g035100 1.0kb downstream 1.0kb downstream 1000 false chr2: 13486218-13487217 Medicago truncatula
Medtr2g035100 2.0kb upstream 2.0kb upstream 4303 true chr2: 13481915-13486217 Medicago truncatula
Medtr2g035100 2.0kb upstream 2.0kb upstream 2000 false chr2: 13481915-13483914 Medicago truncatula
Medtr2g035100 2.0kb downstream 2.0kb downstream 4303 true chr2: 13483915-13488217 Medicago truncatula
Medtr2g035100 2.0kb downstream 2.0kb downstream 2000 false chr2: 13486218-13488217 Medicago truncatula
Medtr2g035100 5.0kb upstream 5.0kb upstream 7303 true chr2: 13478915-13486217 Medicago truncatula
Medtr2g035100 5.0kb upstream 5.0kb upstream 5000 false chr2: 13478915-13483914 Medicago truncatula
Medtr2g035100 5.0kb downstream 5.0kb downstream 7303 true chr2: 13483915-13491217 Medicago truncatula
Medtr2g035100 5.0kb downstream 5.0kb downstream 5000 false chr2: 13486218-13491217 Medicago truncatula
Medtr2g035100 10.0kb upstream 10.0kb upstream 12303 true chr2: 13473915-13486217 Medicago truncatula
Medtr2g035100 10.0kb upstream 10.0kb upstream 10000 false chr2: 13473915-13483914 Medicago truncatula
Medtr2g035100 10.0kb downstream 10.0kb downstream 12303 true chr2: 13483915-13496217 Medicago truncatula
Medtr2g035100 10.0kb downstream 10.0kb downstream 10000 false chr2: 13486218-13496217 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 161.278     High  
cufflinks 11.379     High Low
cufflinks 84.429     High  
cufflinks 448.465     High  
cufflinks 9.257       Low
cufflinks 393.852     High  
cufflinks 585.069     High High
cufflinks 29.804     High  
cufflinks 394.278     High  

0 Strain