Gene : Medtr2g034890 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  transmembrane protein, putative
Genomic Order:  1867 Name:  ? Medtr2g034890
Secondary Identifier:  ? PAC:31065996
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g034890 0.5kb upstream 0.5kb upstream 2139 true chr2: 13396079-13398217 Medicago truncatula
Medtr2g034890 0.5kb upstream 0.5kb upstream 500 false chr2: 13396079-13396578 Medicago truncatula
Medtr2g034890 0.5kb downstream 0.5kb downstream 2139 true chr2: 13396579-13398717 Medicago truncatula
Medtr2g034890 0.5kb downstream 0.5kb downstream 500 false chr2: 13398218-13398717 Medicago truncatula
Medtr2g034890 1.0kb upstream 1.0kb upstream 2639 true chr2: 13395579-13398217 Medicago truncatula
Medtr2g034890 1.0kb upstream 1.0kb upstream 1000 false chr2: 13395579-13396578 Medicago truncatula
Medtr2g034890 1.0kb downstream 1.0kb downstream 2639 true chr2: 13396579-13399217 Medicago truncatula
Medtr2g034890 1.0kb downstream 1.0kb downstream 1000 false chr2: 13398218-13399217 Medicago truncatula
Medtr2g034890 2.0kb upstream 2.0kb upstream 3639 true chr2: 13394579-13398217 Medicago truncatula
Medtr2g034890 2.0kb upstream 2.0kb upstream 2000 false chr2: 13394579-13396578 Medicago truncatula
Medtr2g034890 2.0kb downstream 2.0kb downstream 3639 true chr2: 13396579-13400217 Medicago truncatula
Medtr2g034890 2.0kb downstream 2.0kb downstream 2000 false chr2: 13398218-13400217 Medicago truncatula
Medtr2g034890 5.0kb upstream 5.0kb upstream 6639 true chr2: 13391579-13398217 Medicago truncatula
Medtr2g034890 5.0kb upstream 5.0kb upstream 5000 false chr2: 13391579-13396578 Medicago truncatula
Medtr2g034890 5.0kb downstream 5.0kb downstream 6639 true chr2: 13396579-13403217 Medicago truncatula
Medtr2g034890 5.0kb downstream 5.0kb downstream 5000 false chr2: 13398218-13403217 Medicago truncatula
Medtr2g034890 10.0kb upstream 10.0kb upstream 11639 true chr2: 13386579-13398217 Medicago truncatula
Medtr2g034890 10.0kb upstream 10.0kb upstream 10000 false chr2: 13386579-13396578 Medicago truncatula
Medtr2g034890 10.0kb downstream 10.0kb downstream 11639 true chr2: 13396579-13408217 Medicago truncatula
Medtr2g034890 10.0kb downstream 10.0kb downstream 10000 false chr2: 13398218-13408217 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310206 5265 Fabidae View MSA
124061571 5270 Rosid View MSA
123740931 5271 Pentapetalae View MSA
122790462 5272 Eudicot View MSA
122044950 5273 Angiosperm View MSA
121310368 5274 Embryophyte View MSA
123347870 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.663       High
cufflinks 0.324        
cufflinks 0.225        
cufflinks 0.374        
cufflinks 0.121       Low
cufflinks 1.602       High
cufflinks 2.264       High
cufflinks 0.642        
cufflinks 0.485        

0 Strain