Gene : Medtr2g034550 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15371:SF1 - OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC Description:  outer envelope pore protein
Genomic Order:  1845 Name:  ? Medtr2g034550
Secondary Identifier:  ? PAC:31068227
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g034550 0.5kb upstream 0.5kb upstream 2777 true chr2: 13202151-13204927 Medicago truncatula
Medtr2g034550 0.5kb upstream 0.5kb upstream 500 false chr2: 13204428-13204927 Medicago truncatula
Medtr2g034550 0.5kb downstream 0.5kb downstream 2777 true chr2: 13201651-13204427 Medicago truncatula
Medtr2g034550 0.5kb downstream 0.5kb downstream 500 false chr2: 13201651-13202150 Medicago truncatula
Medtr2g034550 1.0kb upstream 1.0kb upstream 3277 true chr2: 13202151-13205427 Medicago truncatula
Medtr2g034550 1.0kb upstream 1.0kb upstream 1000 false chr2: 13204428-13205427 Medicago truncatula
Medtr2g034550 1.0kb downstream 1.0kb downstream 3277 true chr2: 13201151-13204427 Medicago truncatula
Medtr2g034550 1.0kb downstream 1.0kb downstream 1000 false chr2: 13201151-13202150 Medicago truncatula
Medtr2g034550 2.0kb upstream 2.0kb upstream 4277 true chr2: 13202151-13206427 Medicago truncatula
Medtr2g034550 2.0kb upstream 2.0kb upstream 2000 false chr2: 13204428-13206427 Medicago truncatula
Medtr2g034550 2.0kb downstream 2.0kb downstream 4277 true chr2: 13200151-13204427 Medicago truncatula
Medtr2g034550 2.0kb downstream 2.0kb downstream 2000 false chr2: 13200151-13202150 Medicago truncatula
Medtr2g034550 5.0kb upstream 5.0kb upstream 7277 true chr2: 13202151-13209427 Medicago truncatula
Medtr2g034550 5.0kb upstream 5.0kb upstream 5000 false chr2: 13204428-13209427 Medicago truncatula
Medtr2g034550 5.0kb downstream 5.0kb downstream 7277 true chr2: 13197151-13204427 Medicago truncatula
Medtr2g034550 5.0kb downstream 5.0kb downstream 5000 false chr2: 13197151-13202150 Medicago truncatula
Medtr2g034550 10.0kb upstream 10.0kb upstream 12277 true chr2: 13202151-13214427 Medicago truncatula
Medtr2g034550 10.0kb upstream 10.0kb upstream 10000 false chr2: 13204428-13214427 Medicago truncatula
Medtr2g034550 10.0kb downstream 10.0kb downstream 12277 true chr2: 13192151-13204427 Medicago truncatula
Medtr2g034550 10.0kb downstream 10.0kb downstream 10000 false chr2: 13192151-13202150 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311565 5265 Fabidae View MSA
124062569 5270 Rosid View MSA
123744668 5271 Pentapetalae View MSA
122786883 5272 Eudicot View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.653       High
cufflinks 0.163        
cufflinks 0.03     Low Low
cufflinks 0.125        
cufflinks 0.085        
cufflinks 0.027     Low Low
cufflinks 0.298        
cufflinks 0.124        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain