Gene : Medtr2g022180 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Description:  TVP38/TMEM64 family membrane slr0305-like protein
Genomic Order:  1119 Name:  ? Medtr2g022180
Secondary Identifier:  ? PAC:31067618
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g022180 0.5kb upstream 0.5kb upstream 7491 true chr2: 7613962-7621452 Medicago truncatula
Medtr2g022180 0.5kb upstream 0.5kb upstream 500 false chr2: 7613962-7614461 Medicago truncatula
Medtr2g022180 0.5kb downstream 0.5kb downstream 7491 true chr2: 7614462-7621952 Medicago truncatula
Medtr2g022180 0.5kb downstream 0.5kb downstream 500 false chr2: 7621453-7621952 Medicago truncatula
Medtr2g022180 1.0kb upstream 1.0kb upstream 7991 true chr2: 7613462-7621452 Medicago truncatula
Medtr2g022180 1.0kb upstream 1.0kb upstream 1000 false chr2: 7613462-7614461 Medicago truncatula
Medtr2g022180 1.0kb downstream 1.0kb downstream 7991 true chr2: 7614462-7622452 Medicago truncatula
Medtr2g022180 1.0kb downstream 1.0kb downstream 1000 false chr2: 7621453-7622452 Medicago truncatula
Medtr2g022180 2.0kb upstream 2.0kb upstream 8991 true chr2: 7612462-7621452 Medicago truncatula
Medtr2g022180 2.0kb upstream 2.0kb upstream 2000 false chr2: 7612462-7614461 Medicago truncatula
Medtr2g022180 2.0kb downstream 2.0kb downstream 8991 true chr2: 7614462-7623452 Medicago truncatula
Medtr2g022180 2.0kb downstream 2.0kb downstream 2000 false chr2: 7621453-7623452 Medicago truncatula
Medtr2g022180 5.0kb upstream 5.0kb upstream 11991 true chr2: 7609462-7621452 Medicago truncatula
Medtr2g022180 5.0kb upstream 5.0kb upstream 5000 false chr2: 7609462-7614461 Medicago truncatula
Medtr2g022180 5.0kb downstream 5.0kb downstream 11991 true chr2: 7614462-7626452 Medicago truncatula
Medtr2g022180 5.0kb downstream 5.0kb downstream 5000 false chr2: 7621453-7626452 Medicago truncatula
Medtr2g022180 10.0kb upstream 10.0kb upstream 16991 true chr2: 7604462-7621452 Medicago truncatula
Medtr2g022180 10.0kb upstream 10.0kb upstream 10000 false chr2: 7604462-7614461 Medicago truncatula
Medtr2g022180 10.0kb downstream 10.0kb downstream 16991 true chr2: 7614462-7631452 Medicago truncatula
Medtr2g022180 10.0kb downstream 10.0kb downstream 10000 false chr2: 7621453-7631452 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310014 5265 Fabidae View MSA
124066129 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.684        
cufflinks 2.247        
cufflinks 2.033        
cufflinks 1.403       Low
cufflinks 2.185        
cufflinks 1.709        
cufflinks 2.549        
cufflinks 1.706        
cufflinks 3.585       High

0 Strain