Gene : Medtr2g025550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13773//PTHR13773:SF13 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE Description:  phosphatidate cytidylyltransferase family protein
Genomic Order:  1315 Name:  ? Medtr2g025550
Secondary Identifier:  ? PAC:31067545
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1319 Medicago truncatula pathologic  
Mtruncatula PWY4FS-7 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g025550 0.5kb upstream 0.5kb upstream 7479 true chr2: 9135425-9142903 Medicago truncatula
Medtr2g025550 0.5kb upstream 0.5kb upstream 500 false chr2: 9142404-9142903 Medicago truncatula
Medtr2g025550 0.5kb downstream 0.5kb downstream 7479 true chr2: 9134925-9142403 Medicago truncatula
Medtr2g025550 0.5kb downstream 0.5kb downstream 500 false chr2: 9134925-9135424 Medicago truncatula
Medtr2g025550 1.0kb upstream 1.0kb upstream 7979 true chr2: 9135425-9143403 Medicago truncatula
Medtr2g025550 1.0kb upstream 1.0kb upstream 1000 false chr2: 9142404-9143403 Medicago truncatula
Medtr2g025550 1.0kb downstream 1.0kb downstream 7979 true chr2: 9134425-9142403 Medicago truncatula
Medtr2g025550 1.0kb downstream 1.0kb downstream 1000 false chr2: 9134425-9135424 Medicago truncatula
Medtr2g025550 2.0kb upstream 2.0kb upstream 8979 true chr2: 9135425-9144403 Medicago truncatula
Medtr2g025550 2.0kb upstream 2.0kb upstream 2000 false chr2: 9142404-9144403 Medicago truncatula
Medtr2g025550 2.0kb downstream 2.0kb downstream 8979 true chr2: 9133425-9142403 Medicago truncatula
Medtr2g025550 2.0kb downstream 2.0kb downstream 2000 false chr2: 9133425-9135424 Medicago truncatula
Medtr2g025550 5.0kb upstream 5.0kb upstream 11979 true chr2: 9135425-9147403 Medicago truncatula
Medtr2g025550 5.0kb upstream 5.0kb upstream 5000 false chr2: 9142404-9147403 Medicago truncatula
Medtr2g025550 5.0kb downstream 5.0kb downstream 11979 true chr2: 9130425-9142403 Medicago truncatula
Medtr2g025550 5.0kb downstream 5.0kb downstream 5000 false chr2: 9130425-9135424 Medicago truncatula
Medtr2g025550 10.0kb upstream 10.0kb upstream 16979 true chr2: 9135425-9152403 Medicago truncatula
Medtr2g025550 10.0kb upstream 10.0kb upstream 10000 false chr2: 9142404-9152403 Medicago truncatula
Medtr2g025550 10.0kb downstream 10.0kb downstream 16979 true chr2: 9125425-9142403 Medicago truncatula
Medtr2g025550 10.0kb downstream 10.0kb downstream 10000 false chr2: 9125425-9135424 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302445 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.911       Low
cufflinks 1.574        
cufflinks 1.713        
cufflinks 1.604        
cufflinks 2.218       High
cufflinks 0.605       Low
cufflinks 1.283        
cufflinks 1.526        
cufflinks 1.823        

0 Strain