Gene : Medtr2g027100 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Description:  ADP-ribosylation factor GTPase-activating AGD12-like protein
Genomic Order:  1418 Name:  ? Medtr2g027100
Secondary Identifier:  ? PAC:31067984
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g027100 0.5kb upstream 0.5kb upstream 2952 true chr2: 9873499-9876450 Medicago truncatula
Medtr2g027100 0.5kb upstream 0.5kb upstream 500 false chr2: 9873499-9873998 Medicago truncatula
Medtr2g027100 0.5kb downstream 0.5kb downstream 2952 true chr2: 9873999-9876950 Medicago truncatula
Medtr2g027100 0.5kb downstream 0.5kb downstream 500 false chr2: 9876451-9876950 Medicago truncatula
Medtr2g027100 1.0kb upstream 1.0kb upstream 3452 true chr2: 9872999-9876450 Medicago truncatula
Medtr2g027100 1.0kb upstream 1.0kb upstream 1000 false chr2: 9872999-9873998 Medicago truncatula
Medtr2g027100 1.0kb downstream 1.0kb downstream 3452 true chr2: 9873999-9877450 Medicago truncatula
Medtr2g027100 1.0kb downstream 1.0kb downstream 1000 false chr2: 9876451-9877450 Medicago truncatula
Medtr2g027100 2.0kb upstream 2.0kb upstream 4452 true chr2: 9871999-9876450 Medicago truncatula
Medtr2g027100 2.0kb upstream 2.0kb upstream 2000 false chr2: 9871999-9873998 Medicago truncatula
Medtr2g027100 2.0kb downstream 2.0kb downstream 4452 true chr2: 9873999-9878450 Medicago truncatula
Medtr2g027100 2.0kb downstream 2.0kb downstream 2000 false chr2: 9876451-9878450 Medicago truncatula
Medtr2g027100 5.0kb upstream 5.0kb upstream 7452 true chr2: 9868999-9876450 Medicago truncatula
Medtr2g027100 5.0kb upstream 5.0kb upstream 5000 false chr2: 9868999-9873998 Medicago truncatula
Medtr2g027100 5.0kb downstream 5.0kb downstream 7452 true chr2: 9873999-9881450 Medicago truncatula
Medtr2g027100 5.0kb downstream 5.0kb downstream 5000 false chr2: 9876451-9881450 Medicago truncatula
Medtr2g027100 10.0kb upstream 10.0kb upstream 12452 true chr2: 9863999-9876450 Medicago truncatula
Medtr2g027100 10.0kb upstream 10.0kb upstream 10000 false chr2: 9863999-9873998 Medicago truncatula
Medtr2g027100 10.0kb downstream 10.0kb downstream 12452 true chr2: 9873999-9886450 Medicago truncatula
Medtr2g027100 10.0kb downstream 10.0kb downstream 10000 false chr2: 9876451-9886450 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308501 5265 Fabidae View MSA
124063417 5270 Rosid View MSA
123745125 5271 Pentapetalae View MSA
122791295 5272 Eudicot View MSA
122045342 5273 Angiosperm View MSA
121310436 5274 Embryophyte View MSA
123347920 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.614        
cufflinks 2.519        
cufflinks 3.046        
cufflinks 1.428       Low
cufflinks 3.672        
cufflinks 1.44       Low
cufflinks 6.783       High
cufflinks 2.22        
cufflinks 3.345        

0 Strain