Gene : Medtr2g027090 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12663:SF0 - PDS5 Description:  sister chromatid cohesion PDS5-like protein
Genomic Order:  1417 Name:  ? Medtr2g027090
Secondary Identifier:  ? PAC:31066880
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g027090 0.5kb upstream 0.5kb upstream 18708 true chr2: 9852517-9871224 Medicago truncatula
Medtr2g027090 0.5kb upstream 0.5kb upstream 500 false chr2: 9852517-9853016 Medicago truncatula
Medtr2g027090 0.5kb downstream 0.5kb downstream 18708 true chr2: 9853017-9871724 Medicago truncatula
Medtr2g027090 0.5kb downstream 0.5kb downstream 500 false chr2: 9871225-9871724 Medicago truncatula
Medtr2g027090 1.0kb upstream 1.0kb upstream 19208 true chr2: 9852017-9871224 Medicago truncatula
Medtr2g027090 1.0kb upstream 1.0kb upstream 1000 false chr2: 9852017-9853016 Medicago truncatula
Medtr2g027090 1.0kb downstream 1.0kb downstream 19208 true chr2: 9853017-9872224 Medicago truncatula
Medtr2g027090 1.0kb downstream 1.0kb downstream 1000 false chr2: 9871225-9872224 Medicago truncatula
Medtr2g027090 2.0kb upstream 2.0kb upstream 20208 true chr2: 9851017-9871224 Medicago truncatula
Medtr2g027090 2.0kb upstream 2.0kb upstream 2000 false chr2: 9851017-9853016 Medicago truncatula
Medtr2g027090 2.0kb downstream 2.0kb downstream 20208 true chr2: 9853017-9873224 Medicago truncatula
Medtr2g027090 2.0kb downstream 2.0kb downstream 2000 false chr2: 9871225-9873224 Medicago truncatula
Medtr2g027090 5.0kb upstream 5.0kb upstream 23208 true chr2: 9848017-9871224 Medicago truncatula
Medtr2g027090 5.0kb upstream 5.0kb upstream 5000 false chr2: 9848017-9853016 Medicago truncatula
Medtr2g027090 5.0kb downstream 5.0kb downstream 23208 true chr2: 9853017-9876224 Medicago truncatula
Medtr2g027090 5.0kb downstream 5.0kb downstream 5000 false chr2: 9871225-9876224 Medicago truncatula
Medtr2g027090 10.0kb upstream 10.0kb upstream 28208 true chr2: 9843017-9871224 Medicago truncatula
Medtr2g027090 10.0kb upstream 10.0kb upstream 10000 false chr2: 9843017-9853016 Medicago truncatula
Medtr2g027090 10.0kb downstream 10.0kb downstream 28208 true chr2: 9853017-9881224 Medicago truncatula
Medtr2g027090 10.0kb downstream 10.0kb downstream 10000 false chr2: 9871225-9881224 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313957 5265 Fabidae View MSA
124050365 5270 Rosid View MSA
123751291 5271 Pentapetalae View MSA
122791249 5272 Eudicot View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.518        
cufflinks 7.816        
cufflinks 7.267        
cufflinks 1.199       Low
cufflinks 8.841        
cufflinks 2.216        
cufflinks 3.5        
cufflinks 7.315        
cufflinks 1.962       Low

0 Strain