Gene : Medtr2g086780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12419:SF4 - OTU DOMAIN-CONTAINING PROTEIN 5 Description:  OTU-like cysteine protease
Genomic Order:  4586 Name:  ? Medtr2g086780
Secondary Identifier:  ? PAC:31065093
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g086780 0.5kb upstream 0.5kb upstream 7012 true chr2: 36481389-36488400 Medicago truncatula
Medtr2g086780 0.5kb upstream 0.5kb upstream 500 false chr2: 36481389-36481888 Medicago truncatula
Medtr2g086780 0.5kb downstream 0.5kb downstream 7012 true chr2: 36481889-36488900 Medicago truncatula
Medtr2g086780 0.5kb downstream 0.5kb downstream 500 false chr2: 36488401-36488900 Medicago truncatula
Medtr2g086780 1.0kb upstream 1.0kb upstream 7512 true chr2: 36480889-36488400 Medicago truncatula
Medtr2g086780 1.0kb upstream 1.0kb upstream 1000 false chr2: 36480889-36481888 Medicago truncatula
Medtr2g086780 1.0kb downstream 1.0kb downstream 7512 true chr2: 36481889-36489400 Medicago truncatula
Medtr2g086780 1.0kb downstream 1.0kb downstream 1000 false chr2: 36488401-36489400 Medicago truncatula
Medtr2g086780 2.0kb upstream 2.0kb upstream 8512 true chr2: 36479889-36488400 Medicago truncatula
Medtr2g086780 2.0kb upstream 2.0kb upstream 2000 false chr2: 36479889-36481888 Medicago truncatula
Medtr2g086780 2.0kb downstream 2.0kb downstream 8512 true chr2: 36481889-36490400 Medicago truncatula
Medtr2g086780 2.0kb downstream 2.0kb downstream 2000 false chr2: 36488401-36490400 Medicago truncatula
Medtr2g086780 5.0kb upstream 5.0kb upstream 11512 true chr2: 36476889-36488400 Medicago truncatula
Medtr2g086780 5.0kb upstream 5.0kb upstream 5000 false chr2: 36476889-36481888 Medicago truncatula
Medtr2g086780 5.0kb downstream 5.0kb downstream 11512 true chr2: 36481889-36493400 Medicago truncatula
Medtr2g086780 5.0kb downstream 5.0kb downstream 5000 false chr2: 36488401-36493400 Medicago truncatula
Medtr2g086780 10.0kb upstream 10.0kb upstream 16512 true chr2: 36471889-36488400 Medicago truncatula
Medtr2g086780 10.0kb upstream 10.0kb upstream 10000 false chr2: 36471889-36481888 Medicago truncatula
Medtr2g086780 10.0kb downstream 10.0kb downstream 16512 true chr2: 36481889-36498400 Medicago truncatula
Medtr2g086780 10.0kb downstream 10.0kb downstream 10000 false chr2: 36488401-36498400 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304018 5265 Fabidae View MSA
124067322 5270 Rosid View MSA
123741377 5271 Pentapetalae View MSA
122789653 5272 Eudicot View MSA
122045711 5273 Angiosperm View MSA
121348334 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.397       High
cufflinks 1.387        
cufflinks 2.038        
cufflinks 0.71       Low
cufflinks 1.553        
cufflinks 0.532       Low
cufflinks 2.324       High
cufflinks 1.497        
cufflinks 1.384        

0 Strain