Gene : Medtr2g086500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Description:  ribosomal protein L1p/L10e family protein
Genomic Order:  4565 Name:  ? Medtr2g086500
Secondary Identifier:  ? PAC:31063174
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g086500 0.5kb upstream 0.5kb upstream 3464 true chr2: 36365968-36369431 Medicago truncatula
Medtr2g086500 0.5kb upstream 0.5kb upstream 500 false chr2: 36365968-36366467 Medicago truncatula
Medtr2g086500 0.5kb downstream 0.5kb downstream 3464 true chr2: 36366468-36369931 Medicago truncatula
Medtr2g086500 0.5kb downstream 0.5kb downstream 500 false chr2: 36369432-36369931 Medicago truncatula
Medtr2g086500 1.0kb upstream 1.0kb upstream 3964 true chr2: 36365468-36369431 Medicago truncatula
Medtr2g086500 1.0kb upstream 1.0kb upstream 1000 false chr2: 36365468-36366467 Medicago truncatula
Medtr2g086500 1.0kb downstream 1.0kb downstream 3964 true chr2: 36366468-36370431 Medicago truncatula
Medtr2g086500 1.0kb downstream 1.0kb downstream 1000 false chr2: 36369432-36370431 Medicago truncatula
Medtr2g086500 2.0kb upstream 2.0kb upstream 4964 true chr2: 36364468-36369431 Medicago truncatula
Medtr2g086500 2.0kb upstream 2.0kb upstream 2000 false chr2: 36364468-36366467 Medicago truncatula
Medtr2g086500 2.0kb downstream 2.0kb downstream 4964 true chr2: 36366468-36371431 Medicago truncatula
Medtr2g086500 2.0kb downstream 2.0kb downstream 2000 false chr2: 36369432-36371431 Medicago truncatula
Medtr2g086500 5.0kb upstream 5.0kb upstream 7964 true chr2: 36361468-36369431 Medicago truncatula
Medtr2g086500 5.0kb upstream 5.0kb upstream 5000 false chr2: 36361468-36366467 Medicago truncatula
Medtr2g086500 5.0kb downstream 5.0kb downstream 7964 true chr2: 36366468-36374431 Medicago truncatula
Medtr2g086500 5.0kb downstream 5.0kb downstream 5000 false chr2: 36369432-36374431 Medicago truncatula
Medtr2g086500 10.0kb upstream 10.0kb upstream 12964 true chr2: 36356468-36369431 Medicago truncatula
Medtr2g086500 10.0kb upstream 10.0kb upstream 10000 false chr2: 36356468-36366467 Medicago truncatula
Medtr2g086500 10.0kb downstream 10.0kb downstream 12964 true chr2: 36366468-36379431 Medicago truncatula
Medtr2g086500 10.0kb downstream 10.0kb downstream 10000 false chr2: 36369432-36379431 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304338 5265 Fabidae View MSA
124062102 5270 Rosid View MSA
123750520 5271 Pentapetalae View MSA
122788879 5272 Eudicot View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.635     High  
cufflinks 11.613     High  
cufflinks 10.194     High Low
cufflinks 27.334     High High
cufflinks 21.237     High  
cufflinks 11.773     High  
cufflinks 21.153     High  
cufflinks 12.269     High  
cufflinks 23.097     High High

0 Strain