Gene : Medtr2g090095 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF04410 - Gar1/Naf1 RNA binding region (Gar1) Description:  Gar1/Naf1 RNA-binding region protein
Genomic Order:  4822 Name:  ? Medtr2g090095
Secondary Identifier:  ? PAC:31063876
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090095 0.5kb upstream 0.5kb upstream 3593 true chr2: 38170993-38174585 Medicago truncatula
Medtr2g090095 0.5kb upstream 0.5kb upstream 500 false chr2: 38174086-38174585 Medicago truncatula
Medtr2g090095 0.5kb downstream 0.5kb downstream 3593 true chr2: 38170493-38174085 Medicago truncatula
Medtr2g090095 0.5kb downstream 0.5kb downstream 500 false chr2: 38170493-38170992 Medicago truncatula
Medtr2g090095 1.0kb upstream 1.0kb upstream 4093 true chr2: 38170993-38175085 Medicago truncatula
Medtr2g090095 1.0kb upstream 1.0kb upstream 1000 false chr2: 38174086-38175085 Medicago truncatula
Medtr2g090095 1.0kb downstream 1.0kb downstream 4093 true chr2: 38169993-38174085 Medicago truncatula
Medtr2g090095 1.0kb downstream 1.0kb downstream 1000 false chr2: 38169993-38170992 Medicago truncatula
Medtr2g090095 2.0kb upstream 2.0kb upstream 5093 true chr2: 38170993-38176085 Medicago truncatula
Medtr2g090095 2.0kb upstream 2.0kb upstream 2000 false chr2: 38174086-38176085 Medicago truncatula
Medtr2g090095 2.0kb downstream 2.0kb downstream 5093 true chr2: 38168993-38174085 Medicago truncatula
Medtr2g090095 2.0kb downstream 2.0kb downstream 2000 false chr2: 38168993-38170992 Medicago truncatula
Medtr2g090095 5.0kb upstream 5.0kb upstream 8093 true chr2: 38170993-38179085 Medicago truncatula
Medtr2g090095 5.0kb upstream 5.0kb upstream 5000 false chr2: 38174086-38179085 Medicago truncatula
Medtr2g090095 5.0kb downstream 5.0kb downstream 8093 true chr2: 38165993-38174085 Medicago truncatula
Medtr2g090095 5.0kb downstream 5.0kb downstream 5000 false chr2: 38165993-38170992 Medicago truncatula
Medtr2g090095 10.0kb upstream 10.0kb upstream 13093 true chr2: 38170993-38184085 Medicago truncatula
Medtr2g090095 10.0kb upstream 10.0kb upstream 10000 false chr2: 38174086-38184085 Medicago truncatula
Medtr2g090095 10.0kb downstream 10.0kb downstream 13093 true chr2: 38160993-38174085 Medicago truncatula
Medtr2g090095 10.0kb downstream 10.0kb downstream 10000 false chr2: 38160993-38170992 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041036 5273 Angiosperm View MSA
122295048 5265 Fabidae View MSA
124065409 5270 Rosid View MSA
123746164 5271 Pentapetalae View MSA
122790588 5272 Eudicot View MSA
121343792 5274 Embryophyte View MSA
123424387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.489       High
cufflinks 0.073        
cufflinks 0.074     Low  
cufflinks 0.083        
cufflinks 0.198        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246        
cufflinks 0.044     Low Low
cufflinks 0.171        

0 Strain