Gene : Medtr2g090080 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34053:SF1 - PROTEIN ULTRAPETALA 1-RELATED Description:  ultrapetala developmental regulator
Genomic Order:  4820 Name:  ? Medtr2g090080
Secondary Identifier:  ? PAC:31062304
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090080 0.5kb upstream 0.5kb upstream 3651 true chr2: 38150516-38154166 Medicago truncatula
Medtr2g090080 0.5kb upstream 0.5kb upstream 500 false chr2: 38150516-38151015 Medicago truncatula
Medtr2g090080 0.5kb downstream 0.5kb downstream 3651 true chr2: 38151016-38154666 Medicago truncatula
Medtr2g090080 0.5kb downstream 0.5kb downstream 500 false chr2: 38154167-38154666 Medicago truncatula
Medtr2g090080 1.0kb upstream 1.0kb upstream 4151 true chr2: 38150016-38154166 Medicago truncatula
Medtr2g090080 1.0kb upstream 1.0kb upstream 1000 false chr2: 38150016-38151015 Medicago truncatula
Medtr2g090080 1.0kb downstream 1.0kb downstream 4151 true chr2: 38151016-38155166 Medicago truncatula
Medtr2g090080 1.0kb downstream 1.0kb downstream 1000 false chr2: 38154167-38155166 Medicago truncatula
Medtr2g090080 2.0kb upstream 2.0kb upstream 5151 true chr2: 38149016-38154166 Medicago truncatula
Medtr2g090080 2.0kb upstream 2.0kb upstream 2000 false chr2: 38149016-38151015 Medicago truncatula
Medtr2g090080 2.0kb downstream 2.0kb downstream 5151 true chr2: 38151016-38156166 Medicago truncatula
Medtr2g090080 2.0kb downstream 2.0kb downstream 2000 false chr2: 38154167-38156166 Medicago truncatula
Medtr2g090080 5.0kb upstream 5.0kb upstream 8151 true chr2: 38146016-38154166 Medicago truncatula
Medtr2g090080 5.0kb upstream 5.0kb upstream 5000 false chr2: 38146016-38151015 Medicago truncatula
Medtr2g090080 5.0kb downstream 5.0kb downstream 8151 true chr2: 38151016-38159166 Medicago truncatula
Medtr2g090080 5.0kb downstream 5.0kb downstream 5000 false chr2: 38154167-38159166 Medicago truncatula
Medtr2g090080 10.0kb upstream 10.0kb upstream 13151 true chr2: 38141016-38154166 Medicago truncatula
Medtr2g090080 10.0kb upstream 10.0kb upstream 10000 false chr2: 38141016-38151015 Medicago truncatula
Medtr2g090080 10.0kb downstream 10.0kb downstream 13151 true chr2: 38151016-38164166 Medicago truncatula
Medtr2g090080 10.0kb downstream 10.0kb downstream 10000 false chr2: 38154167-38164166 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299051 5265 Fabidae View MSA
124065655 5270 Rosid View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26       High
cufflinks 0.199        
cufflinks 0.076     Low  
cufflinks 0.03     Low Low
cufflinks 0.139        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112        
cufflinks 0.093        
cufflinks 0.252       High

0 Strain