Gene : Medtr2g089990 M. truncatula Mt4.0v1
Defline:  (1 of 22) PF12609 - Wound-induced protein (DUF3774) Description:  wound-responsive family protein
Genomic Order:  4807 Name:  ? Medtr2g089990
Secondary Identifier:  ? PAC:31063424
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g089990 0.5kb upstream 0.5kb upstream 1289 true chr2: 38068176-38069464 Medicago truncatula
Medtr2g089990 0.5kb upstream 0.5kb upstream 500 false chr2: 38068176-38068675 Medicago truncatula
Medtr2g089990 0.5kb downstream 0.5kb downstream 1289 true chr2: 38068676-38069964 Medicago truncatula
Medtr2g089990 0.5kb downstream 0.5kb downstream 500 false chr2: 38069465-38069964 Medicago truncatula
Medtr2g089990 1.0kb upstream 1.0kb upstream 1789 true chr2: 38067676-38069464 Medicago truncatula
Medtr2g089990 1.0kb upstream 1.0kb upstream 1000 false chr2: 38067676-38068675 Medicago truncatula
Medtr2g089990 1.0kb downstream 1.0kb downstream 1789 true chr2: 38068676-38070464 Medicago truncatula
Medtr2g089990 1.0kb downstream 1.0kb downstream 1000 false chr2: 38069465-38070464 Medicago truncatula
Medtr2g089990 2.0kb upstream 2.0kb upstream 2789 true chr2: 38066676-38069464 Medicago truncatula
Medtr2g089990 2.0kb upstream 2.0kb upstream 2000 false chr2: 38066676-38068675 Medicago truncatula
Medtr2g089990 2.0kb downstream 2.0kb downstream 2789 true chr2: 38068676-38071464 Medicago truncatula
Medtr2g089990 2.0kb downstream 2.0kb downstream 2000 false chr2: 38069465-38071464 Medicago truncatula
Medtr2g089990 5.0kb upstream 5.0kb upstream 5789 true chr2: 38063676-38069464 Medicago truncatula
Medtr2g089990 5.0kb upstream 5.0kb upstream 5000 false chr2: 38063676-38068675 Medicago truncatula
Medtr2g089990 5.0kb downstream 5.0kb downstream 5789 true chr2: 38068676-38074464 Medicago truncatula
Medtr2g089990 5.0kb downstream 5.0kb downstream 5000 false chr2: 38069465-38074464 Medicago truncatula
Medtr2g089990 10.0kb upstream 10.0kb upstream 10789 true chr2: 38058676-38069464 Medicago truncatula
Medtr2g089990 10.0kb upstream 10.0kb upstream 10000 false chr2: 38058676-38068675 Medicago truncatula
Medtr2g089990 10.0kb downstream 10.0kb downstream 10789 true chr2: 38068676-38079464 Medicago truncatula
Medtr2g089990 10.0kb downstream 10.0kb downstream 10000 false chr2: 38069465-38079464 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314984 5265 Fabidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.255        
cufflinks 11.149     High  
cufflinks 4.028       Low
cufflinks 42.79     High High
cufflinks 6.371        
cufflinks 8.647        
cufflinks 51.318     High High
cufflinks 6.082        
cufflinks 69.373     High High

0 Strain