Gene : Medtr2g090605 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14493:SF53 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATED Description:  zinc finger CCCH domain protein
Genomic Order:  4896 Name:  ? Medtr2g090605
Secondary Identifier:  ? PAC:31066361
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090605 0.5kb upstream 0.5kb upstream 2095 true chr2: 38747133-38749227 Medicago truncatula
Medtr2g090605 0.5kb upstream 0.5kb upstream 500 false chr2: 38748728-38749227 Medicago truncatula
Medtr2g090605 0.5kb downstream 0.5kb downstream 2095 true chr2: 38746633-38748727 Medicago truncatula
Medtr2g090605 0.5kb downstream 0.5kb downstream 500 false chr2: 38746633-38747132 Medicago truncatula
Medtr2g090605 1.0kb upstream 1.0kb upstream 2595 true chr2: 38747133-38749727 Medicago truncatula
Medtr2g090605 1.0kb upstream 1.0kb upstream 1000 false chr2: 38748728-38749727 Medicago truncatula
Medtr2g090605 1.0kb downstream 1.0kb downstream 2595 true chr2: 38746133-38748727 Medicago truncatula
Medtr2g090605 1.0kb downstream 1.0kb downstream 1000 false chr2: 38746133-38747132 Medicago truncatula
Medtr2g090605 2.0kb upstream 2.0kb upstream 3595 true chr2: 38747133-38750727 Medicago truncatula
Medtr2g090605 2.0kb upstream 2.0kb upstream 2000 false chr2: 38748728-38750727 Medicago truncatula
Medtr2g090605 2.0kb downstream 2.0kb downstream 3595 true chr2: 38745133-38748727 Medicago truncatula
Medtr2g090605 2.0kb downstream 2.0kb downstream 2000 false chr2: 38745133-38747132 Medicago truncatula
Medtr2g090605 5.0kb upstream 5.0kb upstream 6595 true chr2: 38747133-38753727 Medicago truncatula
Medtr2g090605 5.0kb upstream 5.0kb upstream 5000 false chr2: 38748728-38753727 Medicago truncatula
Medtr2g090605 5.0kb downstream 5.0kb downstream 6595 true chr2: 38742133-38748727 Medicago truncatula
Medtr2g090605 5.0kb downstream 5.0kb downstream 5000 false chr2: 38742133-38747132 Medicago truncatula
Medtr2g090605 10.0kb upstream 10.0kb upstream 11595 true chr2: 38747133-38758727 Medicago truncatula
Medtr2g090605 10.0kb upstream 10.0kb upstream 10000 false chr2: 38748728-38758727 Medicago truncatula
Medtr2g090605 10.0kb downstream 10.0kb downstream 11595 true chr2: 38737133-38748727 Medicago truncatula
Medtr2g090605 10.0kb downstream 10.0kb downstream 10000 false chr2: 38737133-38747132 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307083 5265 Fabidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.172     High High
cufflinks 0.009     Low  
cufflinks 0.038     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154        
cufflinks 0.068        
cufflinks 0.038     Low  

0 Strain