Gene : Medtr2g079830 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  fiber protein Fb34
Genomic Order:  4203 Name:  ? Medtr2g079830
Secondary Identifier:  ? PAC:31067206
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079830 0.5kb upstream 0.5kb upstream 2972 true chr2: 33642906-33645877 Medicago truncatula
Medtr2g079830 0.5kb upstream 0.5kb upstream 500 false chr2: 33645378-33645877 Medicago truncatula
Medtr2g079830 0.5kb downstream 0.5kb downstream 2972 true chr2: 33642406-33645377 Medicago truncatula
Medtr2g079830 0.5kb downstream 0.5kb downstream 500 false chr2: 33642406-33642905 Medicago truncatula
Medtr2g079830 1.0kb upstream 1.0kb upstream 3472 true chr2: 33642906-33646377 Medicago truncatula
Medtr2g079830 1.0kb upstream 1.0kb upstream 1000 false chr2: 33645378-33646377 Medicago truncatula
Medtr2g079830 1.0kb downstream 1.0kb downstream 3472 true chr2: 33641906-33645377 Medicago truncatula
Medtr2g079830 1.0kb downstream 1.0kb downstream 1000 false chr2: 33641906-33642905 Medicago truncatula
Medtr2g079830 2.0kb upstream 2.0kb upstream 4472 true chr2: 33642906-33647377 Medicago truncatula
Medtr2g079830 2.0kb upstream 2.0kb upstream 2000 false chr2: 33645378-33647377 Medicago truncatula
Medtr2g079830 2.0kb downstream 2.0kb downstream 4472 true chr2: 33640906-33645377 Medicago truncatula
Medtr2g079830 2.0kb downstream 2.0kb downstream 2000 false chr2: 33640906-33642905 Medicago truncatula
Medtr2g079830 5.0kb upstream 5.0kb upstream 7472 true chr2: 33642906-33650377 Medicago truncatula
Medtr2g079830 5.0kb upstream 5.0kb upstream 5000 false chr2: 33645378-33650377 Medicago truncatula
Medtr2g079830 5.0kb downstream 5.0kb downstream 7472 true chr2: 33637906-33645377 Medicago truncatula
Medtr2g079830 5.0kb downstream 5.0kb downstream 5000 false chr2: 33637906-33642905 Medicago truncatula
Medtr2g079830 10.0kb upstream 10.0kb upstream 12472 true chr2: 33642906-33655377 Medicago truncatula
Medtr2g079830 10.0kb upstream 10.0kb upstream 10000 false chr2: 33645378-33655377 Medicago truncatula
Medtr2g079830 10.0kb downstream 10.0kb downstream 12472 true chr2: 33632906-33645377 Medicago truncatula
Medtr2g079830 10.0kb downstream 10.0kb downstream 10000 false chr2: 33632906-33642905 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041273 5273 Angiosperm View MSA
122308771 5265 Fabidae View MSA
124066050 5270 Rosid View MSA
123742828 5271 Pentapetalae View MSA
122791764 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.117     High High
cufflinks 13.578     High  
cufflinks 10.131     High  
cufflinks 27.189     High  
cufflinks 30.688     High  
cufflinks 3.439       Low
cufflinks 14.526     High  
cufflinks 13.605     High  
cufflinks 44.05     High High

0 Strain