Gene : Medtr2g079980 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR19241:SF257 - ABC TRANSPORTER G FAMILY MEMBER 9 Description:  white-brown-complex ABC transporter family protein
Genomic Order:  4210 Name:  ? Medtr2g079980
Secondary Identifier:  ? PAC:31064339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079980 0.5kb upstream 0.5kb upstream 3404 true chr2: 33717615-33721018 Medicago truncatula
Medtr2g079980 0.5kb upstream 0.5kb upstream 500 false chr2: 33717615-33718114 Medicago truncatula
Medtr2g079980 0.5kb downstream 0.5kb downstream 3404 true chr2: 33718115-33721518 Medicago truncatula
Medtr2g079980 0.5kb downstream 0.5kb downstream 500 false chr2: 33721019-33721518 Medicago truncatula
Medtr2g079980 1.0kb upstream 1.0kb upstream 3904 true chr2: 33717115-33721018 Medicago truncatula
Medtr2g079980 1.0kb upstream 1.0kb upstream 1000 false chr2: 33717115-33718114 Medicago truncatula
Medtr2g079980 1.0kb downstream 1.0kb downstream 3904 true chr2: 33718115-33722018 Medicago truncatula
Medtr2g079980 1.0kb downstream 1.0kb downstream 1000 false chr2: 33721019-33722018 Medicago truncatula
Medtr2g079980 2.0kb upstream 2.0kb upstream 4904 true chr2: 33716115-33721018 Medicago truncatula
Medtr2g079980 2.0kb upstream 2.0kb upstream 2000 false chr2: 33716115-33718114 Medicago truncatula
Medtr2g079980 2.0kb downstream 2.0kb downstream 4904 true chr2: 33718115-33723018 Medicago truncatula
Medtr2g079980 2.0kb downstream 2.0kb downstream 2000 false chr2: 33721019-33723018 Medicago truncatula
Medtr2g079980 5.0kb upstream 5.0kb upstream 7904 true chr2: 33713115-33721018 Medicago truncatula
Medtr2g079980 5.0kb upstream 5.0kb upstream 5000 false chr2: 33713115-33718114 Medicago truncatula
Medtr2g079980 5.0kb downstream 5.0kb downstream 7904 true chr2: 33718115-33726018 Medicago truncatula
Medtr2g079980 5.0kb downstream 5.0kb downstream 5000 false chr2: 33721019-33726018 Medicago truncatula
Medtr2g079980 10.0kb upstream 10.0kb upstream 12904 true chr2: 33708115-33721018 Medicago truncatula
Medtr2g079980 10.0kb upstream 10.0kb upstream 10000 false chr2: 33708115-33718114 Medicago truncatula
Medtr2g079980 10.0kb downstream 10.0kb downstream 12904 true chr2: 33718115-33731018 Medicago truncatula
Medtr2g079980 10.0kb downstream 10.0kb downstream 10000 false chr2: 33721019-33731018 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303638 5265 Fabidae View MSA
124060493 5270 Rosid View MSA
123736406 5271 Pentapetalae View MSA
122787150 5272 Eudicot View MSA
122048442 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121348566 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain