Gene : Medtr2g072790 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11746//PTHR11746:SF90 - O-METHYLTRANSFERASE Description:  caffeic acid O-methyltransferase
Genomic Order:  3834 Name:  ? Medtr2g072790
Secondary Identifier:  ? PAC:31066102
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g072790 0.5kb upstream 0.5kb upstream 3935 true chr2: 30753360-30757294 Medicago truncatula
Medtr2g072790 0.5kb upstream 0.5kb upstream 500 false chr2: 30756795-30757294 Medicago truncatula
Medtr2g072790 0.5kb downstream 0.5kb downstream 3935 true chr2: 30752860-30756794 Medicago truncatula
Medtr2g072790 0.5kb downstream 0.5kb downstream 500 false chr2: 30752860-30753359 Medicago truncatula
Medtr2g072790 1.0kb upstream 1.0kb upstream 4435 true chr2: 30753360-30757794 Medicago truncatula
Medtr2g072790 1.0kb upstream 1.0kb upstream 1000 false chr2: 30756795-30757794 Medicago truncatula
Medtr2g072790 1.0kb downstream 1.0kb downstream 4435 true chr2: 30752360-30756794 Medicago truncatula
Medtr2g072790 1.0kb downstream 1.0kb downstream 1000 false chr2: 30752360-30753359 Medicago truncatula
Medtr2g072790 2.0kb upstream 2.0kb upstream 5435 true chr2: 30753360-30758794 Medicago truncatula
Medtr2g072790 2.0kb upstream 2.0kb upstream 2000 false chr2: 30756795-30758794 Medicago truncatula
Medtr2g072790 2.0kb downstream 2.0kb downstream 5435 true chr2: 30751360-30756794 Medicago truncatula
Medtr2g072790 2.0kb downstream 2.0kb downstream 2000 false chr2: 30751360-30753359 Medicago truncatula
Medtr2g072790 5.0kb upstream 5.0kb upstream 8435 true chr2: 30753360-30761794 Medicago truncatula
Medtr2g072790 5.0kb upstream 5.0kb upstream 5000 false chr2: 30756795-30761794 Medicago truncatula
Medtr2g072790 5.0kb downstream 5.0kb downstream 8435 true chr2: 30748360-30756794 Medicago truncatula
Medtr2g072790 5.0kb downstream 5.0kb downstream 5000 false chr2: 30748360-30753359 Medicago truncatula
Medtr2g072790 10.0kb upstream 10.0kb upstream 13435 true chr2: 30753360-30766794 Medicago truncatula
Medtr2g072790 10.0kb upstream 10.0kb upstream 10000 false chr2: 30756795-30766794 Medicago truncatula
Medtr2g072790 10.0kb downstream 10.0kb downstream 13435 true chr2: 30743360-30756794 Medicago truncatula
Medtr2g072790 10.0kb downstream 10.0kb downstream 10000 false chr2: 30743360-30753359 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307731 5265 Fabidae View MSA
124062425 5270 Rosid View MSA
123741168 5271 Pentapetalae View MSA
122789556 5272 Eudicot View MSA
122042759 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121310018 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.113        
cufflinks 1.771        
cufflinks 2.453        
cufflinks 1.707        
cufflinks 2.658        
cufflinks 1.556        
cufflinks 3.489        
cufflinks 2.11        
cufflinks 6.922       High

0 Strain