Gene : Medtr2g075840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13609 - UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED Description:  ubiquitin domain protein
Genomic Order:  3969 Name:  ? Medtr2g075840
Secondary Identifier:  ? PAC:31063645
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g075840 0.5kb upstream 0.5kb upstream 4275 true chr2: 31728249-31732523 Medicago truncatula
Medtr2g075840 0.5kb upstream 0.5kb upstream 500 false chr2: 31732024-31732523 Medicago truncatula
Medtr2g075840 0.5kb downstream 0.5kb downstream 4275 true chr2: 31727749-31732023 Medicago truncatula
Medtr2g075840 0.5kb downstream 0.5kb downstream 500 false chr2: 31727749-31728248 Medicago truncatula
Medtr2g075840 1.0kb upstream 1.0kb upstream 4775 true chr2: 31728249-31733023 Medicago truncatula
Medtr2g075840 1.0kb upstream 1.0kb upstream 1000 false chr2: 31732024-31733023 Medicago truncatula
Medtr2g075840 1.0kb downstream 1.0kb downstream 4775 true chr2: 31727249-31732023 Medicago truncatula
Medtr2g075840 1.0kb downstream 1.0kb downstream 1000 false chr2: 31727249-31728248 Medicago truncatula
Medtr2g075840 2.0kb upstream 2.0kb upstream 5775 true chr2: 31728249-31734023 Medicago truncatula
Medtr2g075840 2.0kb upstream 2.0kb upstream 2000 false chr2: 31732024-31734023 Medicago truncatula
Medtr2g075840 2.0kb downstream 2.0kb downstream 5775 true chr2: 31726249-31732023 Medicago truncatula
Medtr2g075840 2.0kb downstream 2.0kb downstream 2000 false chr2: 31726249-31728248 Medicago truncatula
Medtr2g075840 5.0kb upstream 5.0kb upstream 8775 true chr2: 31728249-31737023 Medicago truncatula
Medtr2g075840 5.0kb upstream 5.0kb upstream 5000 false chr2: 31732024-31737023 Medicago truncatula
Medtr2g075840 5.0kb downstream 5.0kb downstream 8775 true chr2: 31723249-31732023 Medicago truncatula
Medtr2g075840 5.0kb downstream 5.0kb downstream 5000 false chr2: 31723249-31728248 Medicago truncatula
Medtr2g075840 10.0kb upstream 10.0kb upstream 13775 true chr2: 31728249-31742023 Medicago truncatula
Medtr2g075840 10.0kb upstream 10.0kb upstream 10000 false chr2: 31732024-31742023 Medicago truncatula
Medtr2g075840 10.0kb downstream 10.0kb downstream 13775 true chr2: 31718249-31732023 Medicago truncatula
Medtr2g075840 10.0kb downstream 10.0kb downstream 10000 false chr2: 31718249-31728248 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303389 5265 Fabidae View MSA
124072522 5270 Rosid View MSA
123744132 5271 Pentapetalae View MSA
122790958 5272 Eudicot View MSA
122048669 5273 Angiosperm View MSA
121350639 5274 Embryophyte View MSA
123426786 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.911        
cufflinks 1.592        
cufflinks 1.879        
cufflinks 1.965        
cufflinks 1.769        
cufflinks 1.258       Low
cufflinks 1.468        
cufflinks 1.181       Low
cufflinks 2.126       High

0 Strain