Gene : Medtr2g077620 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  4050 Name:  ? Medtr2g077620
Secondary Identifier:  ? PAC:31064714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g077620 0.5kb upstream 0.5kb upstream 1409 true chr2: 32263508-32264916 Medicago truncatula
Medtr2g077620 0.5kb upstream 0.5kb upstream 500 false chr2: 32263508-32264007 Medicago truncatula
Medtr2g077620 0.5kb downstream 0.5kb downstream 1409 true chr2: 32264008-32265416 Medicago truncatula
Medtr2g077620 0.5kb downstream 0.5kb downstream 500 false chr2: 32264917-32265416 Medicago truncatula
Medtr2g077620 1.0kb upstream 1.0kb upstream 1909 true chr2: 32263008-32264916 Medicago truncatula
Medtr2g077620 1.0kb upstream 1.0kb upstream 1000 false chr2: 32263008-32264007 Medicago truncatula
Medtr2g077620 1.0kb downstream 1.0kb downstream 1909 true chr2: 32264008-32265916 Medicago truncatula
Medtr2g077620 1.0kb downstream 1.0kb downstream 1000 false chr2: 32264917-32265916 Medicago truncatula
Medtr2g077620 2.0kb upstream 2.0kb upstream 2909 true chr2: 32262008-32264916 Medicago truncatula
Medtr2g077620 2.0kb upstream 2.0kb upstream 2000 false chr2: 32262008-32264007 Medicago truncatula
Medtr2g077620 2.0kb downstream 2.0kb downstream 2909 true chr2: 32264008-32266916 Medicago truncatula
Medtr2g077620 2.0kb downstream 2.0kb downstream 2000 false chr2: 32264917-32266916 Medicago truncatula
Medtr2g077620 5.0kb upstream 5.0kb upstream 5909 true chr2: 32259008-32264916 Medicago truncatula
Medtr2g077620 5.0kb upstream 5.0kb upstream 5000 false chr2: 32259008-32264007 Medicago truncatula
Medtr2g077620 5.0kb downstream 5.0kb downstream 5909 true chr2: 32264008-32269916 Medicago truncatula
Medtr2g077620 5.0kb downstream 5.0kb downstream 5000 false chr2: 32264917-32269916 Medicago truncatula
Medtr2g077620 10.0kb upstream 10.0kb upstream 10909 true chr2: 32254008-32264916 Medicago truncatula
Medtr2g077620 10.0kb upstream 10.0kb upstream 10000 false chr2: 32254008-32264007 Medicago truncatula
Medtr2g077620 10.0kb downstream 10.0kb downstream 10909 true chr2: 32264008-32274916 Medicago truncatula
Medtr2g077620 10.0kb downstream 10.0kb downstream 10000 false chr2: 32264917-32274916 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain