Gene : Medtr2g078640 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Description:  E3 SUMO-protein ligase MMS21
Genomic Order:  4109 Name:  ? Medtr2g078640
Secondary Identifier:  ? PAC:31066547
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g078640 0.5kb upstream 0.5kb upstream 7434 true chr2: 32831603-32839036 Medicago truncatula
Medtr2g078640 0.5kb upstream 0.5kb upstream 500 false chr2: 32838537-32839036 Medicago truncatula
Medtr2g078640 0.5kb downstream 0.5kb downstream 7434 true chr2: 32831103-32838536 Medicago truncatula
Medtr2g078640 0.5kb downstream 0.5kb downstream 500 false chr2: 32831103-32831602 Medicago truncatula
Medtr2g078640 1.0kb upstream 1.0kb upstream 7934 true chr2: 32831603-32839536 Medicago truncatula
Medtr2g078640 1.0kb upstream 1.0kb upstream 1000 false chr2: 32838537-32839536 Medicago truncatula
Medtr2g078640 1.0kb downstream 1.0kb downstream 7934 true chr2: 32830603-32838536 Medicago truncatula
Medtr2g078640 1.0kb downstream 1.0kb downstream 1000 false chr2: 32830603-32831602 Medicago truncatula
Medtr2g078640 2.0kb upstream 2.0kb upstream 8934 true chr2: 32831603-32840536 Medicago truncatula
Medtr2g078640 2.0kb upstream 2.0kb upstream 2000 false chr2: 32838537-32840536 Medicago truncatula
Medtr2g078640 2.0kb downstream 2.0kb downstream 8934 true chr2: 32829603-32838536 Medicago truncatula
Medtr2g078640 2.0kb downstream 2.0kb downstream 2000 false chr2: 32829603-32831602 Medicago truncatula
Medtr2g078640 5.0kb upstream 5.0kb upstream 11934 true chr2: 32831603-32843536 Medicago truncatula
Medtr2g078640 5.0kb upstream 5.0kb upstream 5000 false chr2: 32838537-32843536 Medicago truncatula
Medtr2g078640 5.0kb downstream 5.0kb downstream 11934 true chr2: 32826603-32838536 Medicago truncatula
Medtr2g078640 5.0kb downstream 5.0kb downstream 5000 false chr2: 32826603-32831602 Medicago truncatula
Medtr2g078640 10.0kb upstream 10.0kb upstream 16934 true chr2: 32831603-32848536 Medicago truncatula
Medtr2g078640 10.0kb upstream 10.0kb upstream 10000 false chr2: 32838537-32848536 Medicago truncatula
Medtr2g078640 10.0kb downstream 10.0kb downstream 16934 true chr2: 32821603-32838536 Medicago truncatula
Medtr2g078640 10.0kb downstream 10.0kb downstream 10000 false chr2: 32821603-32831602 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312073 5265 Fabidae View MSA
124064105 5270 Rosid View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.175       Low
cufflinks 0.732        
cufflinks 0.803        
cufflinks 0.903        
cufflinks 0.884        
cufflinks 0.353        
cufflinks 0.583        
cufflinks 0.728        
cufflinks 0.861        

0 Strain