Gene : Medtr2g078680 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  AP2 domain class transcription factor
Genomic Order:  4113 Name:  ? Medtr2g078680
Secondary Identifier:  ? PAC:31066408
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g078680 0.5kb upstream 0.5kb upstream 2066 true chr2: 32866460-32868525 Medicago truncatula
Medtr2g078680 0.5kb upstream 0.5kb upstream 500 false chr2: 32868026-32868525 Medicago truncatula
Medtr2g078680 0.5kb downstream 0.5kb downstream 2066 true chr2: 32865960-32868025 Medicago truncatula
Medtr2g078680 0.5kb downstream 0.5kb downstream 500 false chr2: 32865960-32866459 Medicago truncatula
Medtr2g078680 1.0kb upstream 1.0kb upstream 2566 true chr2: 32866460-32869025 Medicago truncatula
Medtr2g078680 1.0kb upstream 1.0kb upstream 1000 false chr2: 32868026-32869025 Medicago truncatula
Medtr2g078680 1.0kb downstream 1.0kb downstream 2566 true chr2: 32865460-32868025 Medicago truncatula
Medtr2g078680 1.0kb downstream 1.0kb downstream 1000 false chr2: 32865460-32866459 Medicago truncatula
Medtr2g078680 2.0kb upstream 2.0kb upstream 3566 true chr2: 32866460-32870025 Medicago truncatula
Medtr2g078680 2.0kb upstream 2.0kb upstream 2000 false chr2: 32868026-32870025 Medicago truncatula
Medtr2g078680 2.0kb downstream 2.0kb downstream 3566 true chr2: 32864460-32868025 Medicago truncatula
Medtr2g078680 2.0kb downstream 2.0kb downstream 2000 false chr2: 32864460-32866459 Medicago truncatula
Medtr2g078680 5.0kb upstream 5.0kb upstream 6566 true chr2: 32866460-32873025 Medicago truncatula
Medtr2g078680 5.0kb upstream 5.0kb upstream 5000 false chr2: 32868026-32873025 Medicago truncatula
Medtr2g078680 5.0kb downstream 5.0kb downstream 6566 true chr2: 32861460-32868025 Medicago truncatula
Medtr2g078680 5.0kb downstream 5.0kb downstream 5000 false chr2: 32861460-32866459 Medicago truncatula
Medtr2g078680 10.0kb upstream 10.0kb upstream 11566 true chr2: 32866460-32878025 Medicago truncatula
Medtr2g078680 10.0kb upstream 10.0kb upstream 10000 false chr2: 32868026-32878025 Medicago truncatula
Medtr2g078680 10.0kb downstream 10.0kb downstream 11566 true chr2: 32856460-32868025 Medicago truncatula
Medtr2g078680 10.0kb downstream 10.0kb downstream 10000 false chr2: 32856460-32866459 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300094 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 111.931     High  
cufflinks 39.39     High Low
cufflinks 90.458     High  
cufflinks 231.49     High High
cufflinks 48.252     High  
cufflinks 89.107     High  
cufflinks 111.264     High  
cufflinks 37.847     High Low
cufflinks 221.683     High High

0 Strain