Gene : Medtr2g062560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE Description:  glycoside hydrolase family 20 domain protein
Genomic Order:  3377 Name:  ? Medtr2g062560
Secondary Identifier:  ? PAC:31063310
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6902 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g062560 0.5kb upstream 0.5kb upstream 4373 true chr2: 26409629-26414001 Medicago truncatula
Medtr2g062560 0.5kb upstream 0.5kb upstream 500 false chr2: 26409629-26410128 Medicago truncatula
Medtr2g062560 0.5kb downstream 0.5kb downstream 4373 true chr2: 26410129-26414501 Medicago truncatula
Medtr2g062560 0.5kb downstream 0.5kb downstream 500 false chr2: 26414002-26414501 Medicago truncatula
Medtr2g062560 1.0kb upstream 1.0kb upstream 4873 true chr2: 26409129-26414001 Medicago truncatula
Medtr2g062560 1.0kb upstream 1.0kb upstream 1000 false chr2: 26409129-26410128 Medicago truncatula
Medtr2g062560 1.0kb downstream 1.0kb downstream 4873 true chr2: 26410129-26415001 Medicago truncatula
Medtr2g062560 1.0kb downstream 1.0kb downstream 1000 false chr2: 26414002-26415001 Medicago truncatula
Medtr2g062560 2.0kb upstream 2.0kb upstream 5873 true chr2: 26408129-26414001 Medicago truncatula
Medtr2g062560 2.0kb upstream 2.0kb upstream 2000 false chr2: 26408129-26410128 Medicago truncatula
Medtr2g062560 2.0kb downstream 2.0kb downstream 5873 true chr2: 26410129-26416001 Medicago truncatula
Medtr2g062560 2.0kb downstream 2.0kb downstream 2000 false chr2: 26414002-26416001 Medicago truncatula
Medtr2g062560 5.0kb upstream 5.0kb upstream 8873 true chr2: 26405129-26414001 Medicago truncatula
Medtr2g062560 5.0kb upstream 5.0kb upstream 5000 false chr2: 26405129-26410128 Medicago truncatula
Medtr2g062560 5.0kb downstream 5.0kb downstream 8873 true chr2: 26410129-26419001 Medicago truncatula
Medtr2g062560 5.0kb downstream 5.0kb downstream 5000 false chr2: 26414002-26419001 Medicago truncatula
Medtr2g062560 10.0kb upstream 10.0kb upstream 13873 true chr2: 26400129-26414001 Medicago truncatula
Medtr2g062560 10.0kb upstream 10.0kb upstream 10000 false chr2: 26400129-26410128 Medicago truncatula
Medtr2g062560 10.0kb downstream 10.0kb downstream 13873 true chr2: 26410129-26424001 Medicago truncatula
Medtr2g062560 10.0kb downstream 10.0kb downstream 10000 false chr2: 26414002-26424001 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303114 5265 Fabidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.499        
cufflinks 2.198        
cufflinks 1.375        
cufflinks 0.127       Low
cufflinks 3.001       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low Low
cufflinks 1.99        
cufflinks 0.246        

0 Strain