Gene : Medtr2g062920 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG1254 - ATP-citrate lyase Description:  ATP-citrate synthase alpha chain protein
Genomic Order:  3403 Name:  ? Medtr2g062920
Secondary Identifier:  ? PAC:31064792
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5172 Medicago truncatula pathologic  
Mtruncatula PWY-5173 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g062920 0.5kb upstream 0.5kb upstream 4789 true chr2: 26608233-26613021 Medicago truncatula
Medtr2g062920 0.5kb upstream 0.5kb upstream 500 false chr2: 26612522-26613021 Medicago truncatula
Medtr2g062920 0.5kb downstream 0.5kb downstream 4789 true chr2: 26607733-26612521 Medicago truncatula
Medtr2g062920 0.5kb downstream 0.5kb downstream 500 false chr2: 26607733-26608232 Medicago truncatula
Medtr2g062920 1.0kb upstream 1.0kb upstream 5289 true chr2: 26608233-26613521 Medicago truncatula
Medtr2g062920 1.0kb upstream 1.0kb upstream 1000 false chr2: 26612522-26613521 Medicago truncatula
Medtr2g062920 1.0kb downstream 1.0kb downstream 5289 true chr2: 26607233-26612521 Medicago truncatula
Medtr2g062920 1.0kb downstream 1.0kb downstream 1000 false chr2: 26607233-26608232 Medicago truncatula
Medtr2g062920 2.0kb upstream 2.0kb upstream 6289 true chr2: 26608233-26614521 Medicago truncatula
Medtr2g062920 2.0kb upstream 2.0kb upstream 2000 false chr2: 26612522-26614521 Medicago truncatula
Medtr2g062920 2.0kb downstream 2.0kb downstream 6289 true chr2: 26606233-26612521 Medicago truncatula
Medtr2g062920 2.0kb downstream 2.0kb downstream 2000 false chr2: 26606233-26608232 Medicago truncatula
Medtr2g062920 5.0kb upstream 5.0kb upstream 9289 true chr2: 26608233-26617521 Medicago truncatula
Medtr2g062920 5.0kb upstream 5.0kb upstream 5000 false chr2: 26612522-26617521 Medicago truncatula
Medtr2g062920 5.0kb downstream 5.0kb downstream 9289 true chr2: 26603233-26612521 Medicago truncatula
Medtr2g062920 5.0kb downstream 5.0kb downstream 5000 false chr2: 26603233-26608232 Medicago truncatula
Medtr2g062920 10.0kb upstream 10.0kb upstream 14289 true chr2: 26608233-26622521 Medicago truncatula
Medtr2g062920 10.0kb upstream 10.0kb upstream 10000 false chr2: 26612522-26622521 Medicago truncatula
Medtr2g062920 10.0kb downstream 10.0kb downstream 14289 true chr2: 26598233-26612521 Medicago truncatula
Medtr2g062920 10.0kb downstream 10.0kb downstream 10000 false chr2: 26598233-26608232 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313163 5265 Fabidae View MSA
124066765 5270 Rosid View MSA
123744939 5271 Pentapetalae View MSA
122786148 5272 Eudicot View MSA
122042565 5273 Angiosperm View MSA
121348583 5274 Embryophyte View MSA
123428169 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.953        
cufflinks 4.134        
cufflinks 2.172       Low
cufflinks 7.647        
cufflinks 6.572        
cufflinks 1.792       Low
cufflinks 19.208     High High
cufflinks 3.588        
cufflinks 23.657     High High

0 Strain