Gene : Medtr2g070390 M. truncatula Mt4.0v1
Defline:  (1 of 7) KOG1865 - Ubiquitin carboxyl-terminal hydrolase Description:  ubiquitin carboxyl-terminal hydrolase
Genomic Order:  3720 Name:  ? Medtr2g070390
Secondary Identifier:  ? PAC:31064380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g070390 0.5kb upstream 0.5kb upstream 8294 true chr2: 29615218-29623511 Medicago truncatula
Medtr2g070390 0.5kb upstream 0.5kb upstream 500 false chr2: 29623012-29623511 Medicago truncatula
Medtr2g070390 0.5kb downstream 0.5kb downstream 8294 true chr2: 29614718-29623011 Medicago truncatula
Medtr2g070390 0.5kb downstream 0.5kb downstream 500 false chr2: 29614718-29615217 Medicago truncatula
Medtr2g070390 1.0kb upstream 1.0kb upstream 8794 true chr2: 29615218-29624011 Medicago truncatula
Medtr2g070390 1.0kb upstream 1.0kb upstream 1000 false chr2: 29623012-29624011 Medicago truncatula
Medtr2g070390 1.0kb downstream 1.0kb downstream 8794 true chr2: 29614218-29623011 Medicago truncatula
Medtr2g070390 1.0kb downstream 1.0kb downstream 1000 false chr2: 29614218-29615217 Medicago truncatula
Medtr2g070390 2.0kb upstream 2.0kb upstream 9794 true chr2: 29615218-29625011 Medicago truncatula
Medtr2g070390 2.0kb upstream 2.0kb upstream 2000 false chr2: 29623012-29625011 Medicago truncatula
Medtr2g070390 2.0kb downstream 2.0kb downstream 9794 true chr2: 29613218-29623011 Medicago truncatula
Medtr2g070390 2.0kb downstream 2.0kb downstream 2000 false chr2: 29613218-29615217 Medicago truncatula
Medtr2g070390 5.0kb upstream 5.0kb upstream 12794 true chr2: 29615218-29628011 Medicago truncatula
Medtr2g070390 5.0kb upstream 5.0kb upstream 5000 false chr2: 29623012-29628011 Medicago truncatula
Medtr2g070390 5.0kb downstream 5.0kb downstream 12794 true chr2: 29610218-29623011 Medicago truncatula
Medtr2g070390 5.0kb downstream 5.0kb downstream 5000 false chr2: 29610218-29615217 Medicago truncatula
Medtr2g070390 10.0kb upstream 10.0kb upstream 17794 true chr2: 29615218-29633011 Medicago truncatula
Medtr2g070390 10.0kb upstream 10.0kb upstream 10000 false chr2: 29623012-29633011 Medicago truncatula
Medtr2g070390 10.0kb downstream 10.0kb downstream 17794 true chr2: 29605218-29623011 Medicago truncatula
Medtr2g070390 10.0kb downstream 10.0kb downstream 10000 false chr2: 29605218-29615217 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309688 5265 Fabidae View MSA
124067125 5270 Rosid View MSA
123746951 5271 Pentapetalae View MSA
122790465 5272 Eudicot View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.339       High
cufflinks 5.48        
cufflinks 7.503        
cufflinks 5.068        
cufflinks 6.57        
cufflinks 3.109       Low
cufflinks 7.729        
cufflinks 5.696        
cufflinks 6.857        

0 Strain