Gene : Medtr2g438740 M. truncatula Mt4.0v1
Defline:  (1 of 46) KOG4412 - 26S proteasome regulatory complex, subunit PSMD10 Description:  ankyrin repeat plant-like protein
Genomic Order:  2166 Name:  ? Medtr2g438740
Secondary Identifier:  ? PAC:31067975
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g438740 0.5kb upstream 0.5kb upstream 3621 true chr2: 15661862-15665482 Medicago truncatula
Medtr2g438740 0.5kb upstream 0.5kb upstream 500 false chr2: 15664983-15665482 Medicago truncatula
Medtr2g438740 0.5kb downstream 0.5kb downstream 3621 true chr2: 15661362-15664982 Medicago truncatula
Medtr2g438740 0.5kb downstream 0.5kb downstream 500 false chr2: 15661362-15661861 Medicago truncatula
Medtr2g438740 1.0kb upstream 1.0kb upstream 4121 true chr2: 15661862-15665982 Medicago truncatula
Medtr2g438740 1.0kb upstream 1.0kb upstream 1000 false chr2: 15664983-15665982 Medicago truncatula
Medtr2g438740 1.0kb downstream 1.0kb downstream 4121 true chr2: 15660862-15664982 Medicago truncatula
Medtr2g438740 1.0kb downstream 1.0kb downstream 1000 false chr2: 15660862-15661861 Medicago truncatula
Medtr2g438740 2.0kb upstream 2.0kb upstream 5121 true chr2: 15661862-15666982 Medicago truncatula
Medtr2g438740 2.0kb upstream 2.0kb upstream 2000 false chr2: 15664983-15666982 Medicago truncatula
Medtr2g438740 2.0kb downstream 2.0kb downstream 5121 true chr2: 15659862-15664982 Medicago truncatula
Medtr2g438740 2.0kb downstream 2.0kb downstream 2000 false chr2: 15659862-15661861 Medicago truncatula
Medtr2g438740 5.0kb upstream 5.0kb upstream 8121 true chr2: 15661862-15669982 Medicago truncatula
Medtr2g438740 5.0kb upstream 5.0kb upstream 5000 false chr2: 15664983-15669982 Medicago truncatula
Medtr2g438740 5.0kb downstream 5.0kb downstream 8121 true chr2: 15656862-15664982 Medicago truncatula
Medtr2g438740 5.0kb downstream 5.0kb downstream 5000 false chr2: 15656862-15661861 Medicago truncatula
Medtr2g438740 10.0kb upstream 10.0kb upstream 13121 true chr2: 15661862-15674982 Medicago truncatula
Medtr2g438740 10.0kb upstream 10.0kb upstream 10000 false chr2: 15664983-15674982 Medicago truncatula
Medtr2g438740 10.0kb downstream 10.0kb downstream 13121 true chr2: 15651862-15664982 Medicago truncatula
Medtr2g438740 10.0kb downstream 10.0kb downstream 10000 false chr2: 15651862-15661861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310241 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.362       Low
cufflinks 11.559     High  
cufflinks 5.894        
cufflinks 4.01        
cufflinks 21.26     High High
cufflinks 1.948        
cufflinks 7.276        
cufflinks 8.639        
cufflinks 7.48        

0 Strain