Gene : Medtr2g438580 M. truncatula Mt4.0v1
Defline:  (1 of 86) PF13962 - Domain of unknown function (PGG) Description:  ankyrin repeat protein
Genomic Order:  2158 Name:  ? Medtr2g438580
Secondary Identifier:  ? PAC:31066316
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g438580 0.5kb upstream 0.5kb upstream 755 true chr2: 15601177-15601931 Medicago truncatula
Medtr2g438580 0.5kb upstream 0.5kb upstream 500 false chr2: 15601432-15601931 Medicago truncatula
Medtr2g438580 0.5kb downstream 0.5kb downstream 755 true chr2: 15600677-15601431 Medicago truncatula
Medtr2g438580 0.5kb downstream 0.5kb downstream 500 false chr2: 15600677-15601176 Medicago truncatula
Medtr2g438580 1.0kb upstream 1.0kb upstream 1255 true chr2: 15601177-15602431 Medicago truncatula
Medtr2g438580 1.0kb upstream 1.0kb upstream 1000 false chr2: 15601432-15602431 Medicago truncatula
Medtr2g438580 1.0kb downstream 1.0kb downstream 1255 true chr2: 15600177-15601431 Medicago truncatula
Medtr2g438580 1.0kb downstream 1.0kb downstream 1000 false chr2: 15600177-15601176 Medicago truncatula
Medtr2g438580 2.0kb upstream 2.0kb upstream 2255 true chr2: 15601177-15603431 Medicago truncatula
Medtr2g438580 2.0kb upstream 2.0kb upstream 2000 false chr2: 15601432-15603431 Medicago truncatula
Medtr2g438580 2.0kb downstream 2.0kb downstream 2255 true chr2: 15599177-15601431 Medicago truncatula
Medtr2g438580 2.0kb downstream 2.0kb downstream 2000 false chr2: 15599177-15601176 Medicago truncatula
Medtr2g438580 5.0kb upstream 5.0kb upstream 5255 true chr2: 15601177-15606431 Medicago truncatula
Medtr2g438580 5.0kb upstream 5.0kb upstream 5000 false chr2: 15601432-15606431 Medicago truncatula
Medtr2g438580 5.0kb downstream 5.0kb downstream 5255 true chr2: 15596177-15601431 Medicago truncatula
Medtr2g438580 5.0kb downstream 5.0kb downstream 5000 false chr2: 15596177-15601176 Medicago truncatula
Medtr2g438580 10.0kb upstream 10.0kb upstream 10255 true chr2: 15601177-15611431 Medicago truncatula
Medtr2g438580 10.0kb upstream 10.0kb upstream 10000 false chr2: 15601432-15611431 Medicago truncatula
Medtr2g438580 10.0kb downstream 10.0kb downstream 10255 true chr2: 15591177-15601431 Medicago truncatula
Medtr2g438580 10.0kb downstream 10.0kb downstream 10000 false chr2: 15591177-15601176 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122258510 5265 Fabidae Singleton cluster - no MSA
124074889 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain