Gene : Medtr3g088435 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12383//PTHR12383:SF24 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Description:  signal peptidase I family protein
Genomic Order:  4688 Name:  ? Medtr3g088435
Secondary Identifier:  ? PAC:31058205
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088435 0.5kb upstream 0.5kb upstream 5354 true chr3: 40185347-40190700 Medicago truncatula
Medtr3g088435 0.5kb upstream 0.5kb upstream 500 false chr3: 40185347-40185846 Medicago truncatula
Medtr3g088435 0.5kb downstream 0.5kb downstream 5354 true chr3: 40185847-40191200 Medicago truncatula
Medtr3g088435 0.5kb downstream 0.5kb downstream 500 false chr3: 40190701-40191200 Medicago truncatula
Medtr3g088435 1.0kb upstream 1.0kb upstream 5854 true chr3: 40184847-40190700 Medicago truncatula
Medtr3g088435 1.0kb upstream 1.0kb upstream 1000 false chr3: 40184847-40185846 Medicago truncatula
Medtr3g088435 1.0kb downstream 1.0kb downstream 5854 true chr3: 40185847-40191700 Medicago truncatula
Medtr3g088435 1.0kb downstream 1.0kb downstream 1000 false chr3: 40190701-40191700 Medicago truncatula
Medtr3g088435 2.0kb upstream 2.0kb upstream 6854 true chr3: 40183847-40190700 Medicago truncatula
Medtr3g088435 2.0kb upstream 2.0kb upstream 2000 false chr3: 40183847-40185846 Medicago truncatula
Medtr3g088435 2.0kb downstream 2.0kb downstream 6854 true chr3: 40185847-40192700 Medicago truncatula
Medtr3g088435 2.0kb downstream 2.0kb downstream 2000 false chr3: 40190701-40192700 Medicago truncatula
Medtr3g088435 5.0kb upstream 5.0kb upstream 9854 true chr3: 40180847-40190700 Medicago truncatula
Medtr3g088435 5.0kb upstream 5.0kb upstream 5000 false chr3: 40180847-40185846 Medicago truncatula
Medtr3g088435 5.0kb downstream 5.0kb downstream 9854 true chr3: 40185847-40195700 Medicago truncatula
Medtr3g088435 5.0kb downstream 5.0kb downstream 5000 false chr3: 40190701-40195700 Medicago truncatula
Medtr3g088435 10.0kb upstream 10.0kb upstream 14854 true chr3: 40175847-40190700 Medicago truncatula
Medtr3g088435 10.0kb upstream 10.0kb upstream 10000 false chr3: 40175847-40185846 Medicago truncatula
Medtr3g088435 10.0kb downstream 10.0kb downstream 14854 true chr3: 40185847-40200700 Medicago truncatula
Medtr3g088435 10.0kb downstream 10.0kb downstream 10000 false chr3: 40190701-40200700 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302113 5265 Fabidae View MSA
124069659 5270 Rosid View MSA
123750550 5271 Pentapetalae View MSA
122773721 5272 Eudicot View MSA
122044516 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.049        
cufflinks 1.111        
cufflinks 1.035        
cufflinks 2.315        
cufflinks 1.51        
cufflinks 1.012        
cufflinks 4.345       High
cufflinks 0.72       Low
cufflinks 3.218       High

0 Strain