Gene : Medtr3g088120 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 Description:  replication factor C subunit 5
Genomic Order:  4654 Name:  ? Medtr3g088120
Secondary Identifier:  ? PAC:31053561
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088120 0.5kb upstream 0.5kb upstream 6890 true chr3: 39957680-39964569 Medicago truncatula
Medtr3g088120 0.5kb upstream 0.5kb upstream 500 false chr3: 39964070-39964569 Medicago truncatula
Medtr3g088120 0.5kb downstream 0.5kb downstream 6890 true chr3: 39957180-39964069 Medicago truncatula
Medtr3g088120 0.5kb downstream 0.5kb downstream 500 false chr3: 39957180-39957679 Medicago truncatula
Medtr3g088120 1.0kb upstream 1.0kb upstream 7390 true chr3: 39957680-39965069 Medicago truncatula
Medtr3g088120 1.0kb upstream 1.0kb upstream 1000 false chr3: 39964070-39965069 Medicago truncatula
Medtr3g088120 1.0kb downstream 1.0kb downstream 7390 true chr3: 39956680-39964069 Medicago truncatula
Medtr3g088120 1.0kb downstream 1.0kb downstream 1000 false chr3: 39956680-39957679 Medicago truncatula
Medtr3g088120 2.0kb upstream 2.0kb upstream 8390 true chr3: 39957680-39966069 Medicago truncatula
Medtr3g088120 2.0kb upstream 2.0kb upstream 2000 false chr3: 39964070-39966069 Medicago truncatula
Medtr3g088120 2.0kb downstream 2.0kb downstream 8390 true chr3: 39955680-39964069 Medicago truncatula
Medtr3g088120 2.0kb downstream 2.0kb downstream 2000 false chr3: 39955680-39957679 Medicago truncatula
Medtr3g088120 5.0kb upstream 5.0kb upstream 11390 true chr3: 39957680-39969069 Medicago truncatula
Medtr3g088120 5.0kb upstream 5.0kb upstream 5000 false chr3: 39964070-39969069 Medicago truncatula
Medtr3g088120 5.0kb downstream 5.0kb downstream 11390 true chr3: 39952680-39964069 Medicago truncatula
Medtr3g088120 5.0kb downstream 5.0kb downstream 5000 false chr3: 39952680-39957679 Medicago truncatula
Medtr3g088120 10.0kb upstream 10.0kb upstream 16390 true chr3: 39957680-39974069 Medicago truncatula
Medtr3g088120 10.0kb upstream 10.0kb upstream 10000 false chr3: 39964070-39974069 Medicago truncatula
Medtr3g088120 10.0kb downstream 10.0kb downstream 16390 true chr3: 39947680-39964069 Medicago truncatula
Medtr3g088120 10.0kb downstream 10.0kb downstream 10000 false chr3: 39947680-39957679 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303095 5265 Fabidae View MSA
124063888 5270 Rosid View MSA
123738354 5271 Pentapetalae View MSA
122793599 5272 Eudicot View MSA
122045152 5273 Angiosperm View MSA
121344274 5274 Embryophyte View MSA
123424030 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.515        
cufflinks 0.218        
cufflinks 0.154        
cufflinks 0.457        
cufflinks 0.239        
cufflinks 0.135     Low Low
cufflinks 0.795       High
cufflinks 0.155        
cufflinks 1.203       High

0 Strain