Gene : Medtr3g088140 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24078:SF294 - DNAJ PROTEIN HOMOLOG 1 Description:  DnaJ chaperone carboxy-terminal domain protein
Genomic Order:  4656 Name:  ? Medtr3g088140
Secondary Identifier:  ? PAC:31058170
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088140 0.5kb upstream 0.5kb upstream 2348 true chr3: 39966998-39969345 Medicago truncatula
Medtr3g088140 0.5kb upstream 0.5kb upstream 500 false chr3: 39966998-39967497 Medicago truncatula
Medtr3g088140 0.5kb downstream 0.5kb downstream 2348 true chr3: 39967498-39969845 Medicago truncatula
Medtr3g088140 0.5kb downstream 0.5kb downstream 500 false chr3: 39969346-39969845 Medicago truncatula
Medtr3g088140 1.0kb upstream 1.0kb upstream 2848 true chr3: 39966498-39969345 Medicago truncatula
Medtr3g088140 1.0kb upstream 1.0kb upstream 1000 false chr3: 39966498-39967497 Medicago truncatula
Medtr3g088140 1.0kb downstream 1.0kb downstream 2848 true chr3: 39967498-39970345 Medicago truncatula
Medtr3g088140 1.0kb downstream 1.0kb downstream 1000 false chr3: 39969346-39970345 Medicago truncatula
Medtr3g088140 2.0kb upstream 2.0kb upstream 3848 true chr3: 39965498-39969345 Medicago truncatula
Medtr3g088140 2.0kb upstream 2.0kb upstream 2000 false chr3: 39965498-39967497 Medicago truncatula
Medtr3g088140 2.0kb downstream 2.0kb downstream 3848 true chr3: 39967498-39971345 Medicago truncatula
Medtr3g088140 2.0kb downstream 2.0kb downstream 2000 false chr3: 39969346-39971345 Medicago truncatula
Medtr3g088140 5.0kb upstream 5.0kb upstream 6848 true chr3: 39962498-39969345 Medicago truncatula
Medtr3g088140 5.0kb upstream 5.0kb upstream 5000 false chr3: 39962498-39967497 Medicago truncatula
Medtr3g088140 5.0kb downstream 5.0kb downstream 6848 true chr3: 39967498-39974345 Medicago truncatula
Medtr3g088140 5.0kb downstream 5.0kb downstream 5000 false chr3: 39969346-39974345 Medicago truncatula
Medtr3g088140 10.0kb upstream 10.0kb upstream 11848 true chr3: 39957498-39969345 Medicago truncatula
Medtr3g088140 10.0kb upstream 10.0kb upstream 10000 false chr3: 39957498-39967497 Medicago truncatula
Medtr3g088140 10.0kb downstream 10.0kb downstream 11848 true chr3: 39967498-39979345 Medicago truncatula
Medtr3g088140 10.0kb downstream 10.0kb downstream 10000 false chr3: 39969346-39979345 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306786 5265 Fabidae View MSA
124067740 5270 Rosid View MSA
123753660 5271 Pentapetalae View MSA
122794908 5272 Eudicot View MSA
122051182 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain