Gene : Medtr3g006790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B) Description:  hypothetical protein
Genomic Order:  112 Name:  ? Medtr3g006790
Secondary Identifier:  ? PAC:31058676
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g006790 0.5kb upstream 0.5kb upstream 3712 true chr3: 864960-868671 Medicago truncatula
Medtr3g006790 0.5kb upstream 0.5kb upstream 500 false chr3: 868172-868671 Medicago truncatula
Medtr3g006790 0.5kb downstream 0.5kb downstream 3712 true chr3: 864460-868171 Medicago truncatula
Medtr3g006790 0.5kb downstream 0.5kb downstream 500 false chr3: 864460-864959 Medicago truncatula
Medtr3g006790 1.0kb upstream 1.0kb upstream 4212 true chr3: 864960-869171 Medicago truncatula
Medtr3g006790 1.0kb upstream 1.0kb upstream 1000 false chr3: 868172-869171 Medicago truncatula
Medtr3g006790 1.0kb downstream 1.0kb downstream 4212 true chr3: 863960-868171 Medicago truncatula
Medtr3g006790 1.0kb downstream 1.0kb downstream 1000 false chr3: 863960-864959 Medicago truncatula
Medtr3g006790 2.0kb upstream 2.0kb upstream 5212 true chr3: 864960-870171 Medicago truncatula
Medtr3g006790 2.0kb upstream 2.0kb upstream 2000 false chr3: 868172-870171 Medicago truncatula
Medtr3g006790 2.0kb downstream 2.0kb downstream 5212 true chr3: 862960-868171 Medicago truncatula
Medtr3g006790 2.0kb downstream 2.0kb downstream 2000 false chr3: 862960-864959 Medicago truncatula
Medtr3g006790 5.0kb upstream 5.0kb upstream 8212 true chr3: 864960-873171 Medicago truncatula
Medtr3g006790 5.0kb upstream 5.0kb upstream 5000 false chr3: 868172-873171 Medicago truncatula
Medtr3g006790 5.0kb downstream 5.0kb downstream 8212 true chr3: 859960-868171 Medicago truncatula
Medtr3g006790 5.0kb downstream 5.0kb downstream 5000 false chr3: 859960-864959 Medicago truncatula
Medtr3g006790 10.0kb upstream 10.0kb upstream 13212 true chr3: 864960-878171 Medicago truncatula
Medtr3g006790 10.0kb upstream 10.0kb upstream 10000 false chr3: 868172-878171 Medicago truncatula
Medtr3g006790 10.0kb downstream 10.0kb downstream 13212 true chr3: 854960-868171 Medicago truncatula
Medtr3g006790 10.0kb downstream 10.0kb downstream 10000 false chr3: 854960-864959 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306560 5265 Fabidae View MSA
124062488 5270 Rosid View MSA
123750657 5271 Pentapetalae View MSA
122790384 5272 Eudicot View MSA
122048656 5273 Angiosperm View MSA
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.887        
cufflinks 4.914        
cufflinks 6.389       High
cufflinks 2.837       Low
cufflinks 5.137        
cufflinks 4.081        
cufflinks 5.8        
cufflinks 4.756        
cufflinks 4.013        

0 Strain