Gene : Medtr3g006350 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  86
Name:  ? Medtr3g006350 Secondary Identifier:  ? PAC:31059469
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g006350 0.5kb upstream 0.5kb upstream 4705 true chr3: 648861-653565 Medicago truncatula
Medtr3g006350 0.5kb upstream 0.5kb upstream 500 false chr3: 653066-653565 Medicago truncatula
Medtr3g006350 0.5kb downstream 0.5kb downstream 4705 true chr3: 648361-653065 Medicago truncatula
Medtr3g006350 0.5kb downstream 0.5kb downstream 500 false chr3: 648361-648860 Medicago truncatula
Medtr3g006350 1.0kb upstream 1.0kb upstream 5205 true chr3: 648861-654065 Medicago truncatula
Medtr3g006350 1.0kb upstream 1.0kb upstream 1000 false chr3: 653066-654065 Medicago truncatula
Medtr3g006350 1.0kb downstream 1.0kb downstream 5205 true chr3: 647861-653065 Medicago truncatula
Medtr3g006350 1.0kb downstream 1.0kb downstream 1000 false chr3: 647861-648860 Medicago truncatula
Medtr3g006350 2.0kb upstream 2.0kb upstream 6205 true chr3: 648861-655065 Medicago truncatula
Medtr3g006350 2.0kb upstream 2.0kb upstream 2000 false chr3: 653066-655065 Medicago truncatula
Medtr3g006350 2.0kb downstream 2.0kb downstream 6205 true chr3: 646861-653065 Medicago truncatula
Medtr3g006350 2.0kb downstream 2.0kb downstream 2000 false chr3: 646861-648860 Medicago truncatula
Medtr3g006350 5.0kb upstream 5.0kb upstream 9205 true chr3: 648861-658065 Medicago truncatula
Medtr3g006350 5.0kb upstream 5.0kb upstream 5000 false chr3: 653066-658065 Medicago truncatula
Medtr3g006350 5.0kb downstream 5.0kb downstream 9205 true chr3: 643861-653065 Medicago truncatula
Medtr3g006350 5.0kb downstream 5.0kb downstream 5000 false chr3: 643861-648860 Medicago truncatula
Medtr3g006350 10.0kb upstream 10.0kb upstream 14205 true chr3: 648861-663065 Medicago truncatula
Medtr3g006350 10.0kb upstream 10.0kb upstream 10000 false chr3: 653066-663065 Medicago truncatula
Medtr3g006350 10.0kb downstream 10.0kb downstream 14205 true chr3: 638861-653065 Medicago truncatula
Medtr3g006350 10.0kb downstream 10.0kb downstream 10000 false chr3: 638861-648860 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028016 5273 Angiosperm View MSA
122297720 5265 Fabidae View MSA
124066244 5270 Rosid View MSA
123739100 5271 Pentapetalae View MSA
122796008 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.892     High  
cufflinks 31.893     High  
cufflinks 48.249     High High
cufflinks 12.008     High  
cufflinks 41.371     High High
cufflinks 5.677       Low
cufflinks 13.839     High  
cufflinks 35.866     High  
cufflinks 11.556     High  

0 Strain