Gene : Medtr3g005810 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10073:SF40 - DNA MISMATCH REPAIR PROTEIN MLH1 Description:  DNA mismatch repair protein MLH1, putative
Genomic Order:  52 Name:  ? Medtr3g005810
Secondary Identifier:  ? PAC:31057879
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g005810 0.5kb upstream 0.5kb upstream 12698 true chr3: 391690-404387 Medicago truncatula
Medtr3g005810 0.5kb upstream 0.5kb upstream 500 false chr3: 403888-404387 Medicago truncatula
Medtr3g005810 0.5kb downstream 0.5kb downstream 12698 true chr3: 391190-403887 Medicago truncatula
Medtr3g005810 0.5kb downstream 0.5kb downstream 500 false chr3: 391190-391689 Medicago truncatula
Medtr3g005810 1.0kb upstream 1.0kb upstream 13198 true chr3: 391690-404887 Medicago truncatula
Medtr3g005810 1.0kb upstream 1.0kb upstream 1000 false chr3: 403888-404887 Medicago truncatula
Medtr3g005810 1.0kb downstream 1.0kb downstream 13198 true chr3: 390690-403887 Medicago truncatula
Medtr3g005810 1.0kb downstream 1.0kb downstream 1000 false chr3: 390690-391689 Medicago truncatula
Medtr3g005810 2.0kb upstream 2.0kb upstream 14198 true chr3: 391690-405887 Medicago truncatula
Medtr3g005810 2.0kb upstream 2.0kb upstream 2000 false chr3: 403888-405887 Medicago truncatula
Medtr3g005810 2.0kb downstream 2.0kb downstream 14198 true chr3: 389690-403887 Medicago truncatula
Medtr3g005810 2.0kb downstream 2.0kb downstream 2000 false chr3: 389690-391689 Medicago truncatula
Medtr3g005810 5.0kb upstream 5.0kb upstream 17198 true chr3: 391690-408887 Medicago truncatula
Medtr3g005810 5.0kb upstream 5.0kb upstream 5000 false chr3: 403888-408887 Medicago truncatula
Medtr3g005810 5.0kb downstream 5.0kb downstream 17198 true chr3: 386690-403887 Medicago truncatula
Medtr3g005810 5.0kb downstream 5.0kb downstream 5000 false chr3: 386690-391689 Medicago truncatula
Medtr3g005810 10.0kb upstream 10.0kb upstream 22198 true chr3: 391690-413887 Medicago truncatula
Medtr3g005810 10.0kb upstream 10.0kb upstream 10000 false chr3: 403888-413887 Medicago truncatula
Medtr3g005810 10.0kb downstream 10.0kb downstream 22198 true chr3: 381690-403887 Medicago truncatula
Medtr3g005810 10.0kb downstream 10.0kb downstream 10000 false chr3: 381690-391689 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300480 5265 Fabidae View MSA
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.24        
cufflinks 0.162        
cufflinks 0.239        
cufflinks 0.077       Low
cufflinks 0.158        
cufflinks 0.376       High
cufflinks 0.152        
cufflinks 0.176        
cufflinks 0.277        

0 Strain