Gene : Medtr2g102800 M. truncatula Mt4.0v1
Defline:  (1 of 4) 3.8.1.5 - Haloalkane dehalogenase / 1-chlorohexane halidohydrolase Description:  alpha/beta fold hydrolase
Genomic Order:  5657 Name:  ? Medtr2g102800
Secondary Identifier:  ? PAC:31064893
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g102800 0.5kb upstream 0.5kb upstream 6003 true chr2: 44290707-44296709 Medicago truncatula
Medtr2g102800 0.5kb upstream 0.5kb upstream 500 false chr2: 44290707-44291206 Medicago truncatula
Medtr2g102800 0.5kb downstream 0.5kb downstream 6003 true chr2: 44291207-44297209 Medicago truncatula
Medtr2g102800 0.5kb downstream 0.5kb downstream 500 false chr2: 44296710-44297209 Medicago truncatula
Medtr2g102800 1.0kb upstream 1.0kb upstream 6503 true chr2: 44290207-44296709 Medicago truncatula
Medtr2g102800 1.0kb upstream 1.0kb upstream 1000 false chr2: 44290207-44291206 Medicago truncatula
Medtr2g102800 1.0kb downstream 1.0kb downstream 6503 true chr2: 44291207-44297709 Medicago truncatula
Medtr2g102800 1.0kb downstream 1.0kb downstream 1000 false chr2: 44296710-44297709 Medicago truncatula
Medtr2g102800 2.0kb upstream 2.0kb upstream 7503 true chr2: 44289207-44296709 Medicago truncatula
Medtr2g102800 2.0kb upstream 2.0kb upstream 2000 false chr2: 44289207-44291206 Medicago truncatula
Medtr2g102800 2.0kb downstream 2.0kb downstream 7503 true chr2: 44291207-44298709 Medicago truncatula
Medtr2g102800 2.0kb downstream 2.0kb downstream 2000 false chr2: 44296710-44298709 Medicago truncatula
Medtr2g102800 5.0kb upstream 5.0kb upstream 10503 true chr2: 44286207-44296709 Medicago truncatula
Medtr2g102800 5.0kb upstream 5.0kb upstream 5000 false chr2: 44286207-44291206 Medicago truncatula
Medtr2g102800 5.0kb downstream 5.0kb downstream 10503 true chr2: 44291207-44301709 Medicago truncatula
Medtr2g102800 5.0kb downstream 5.0kb downstream 5000 false chr2: 44296710-44301709 Medicago truncatula
Medtr2g102800 10.0kb upstream 10.0kb upstream 15503 true chr2: 44281207-44296709 Medicago truncatula
Medtr2g102800 10.0kb upstream 10.0kb upstream 10000 false chr2: 44281207-44291206 Medicago truncatula
Medtr2g102800 10.0kb downstream 10.0kb downstream 15503 true chr2: 44291207-44306709 Medicago truncatula
Medtr2g102800 10.0kb downstream 10.0kb downstream 10000 false chr2: 44296710-44306709 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309229 5265 Fabidae View MSA
124065510 5270 Rosid View MSA
123753600 5271 Pentapetalae View MSA
122789724 5272 Eudicot View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.113        
cufflinks 1.169        
cufflinks 1.65       High
cufflinks 0.857        
cufflinks 1.752       High
cufflinks 0.738       Low
cufflinks 0.884        
cufflinks 1.23        
cufflinks 1.052        

0 Strain