Gene : Medtr2g103730 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Description:  phospholipase D alpha 1
Genomic Order:  5714 Name:  ? Medtr2g103730
Secondary Identifier:  ? PAC:31062343
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3561 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g103730 0.5kb upstream 0.5kb upstream 5571 true chr2: 44658785-44664355 Medicago truncatula
Medtr2g103730 0.5kb upstream 0.5kb upstream 500 false chr2: 44658785-44659284 Medicago truncatula
Medtr2g103730 0.5kb downstream 0.5kb downstream 5571 true chr2: 44659285-44664855 Medicago truncatula
Medtr2g103730 0.5kb downstream 0.5kb downstream 500 false chr2: 44664356-44664855 Medicago truncatula
Medtr2g103730 1.0kb upstream 1.0kb upstream 6071 true chr2: 44658285-44664355 Medicago truncatula
Medtr2g103730 1.0kb upstream 1.0kb upstream 1000 false chr2: 44658285-44659284 Medicago truncatula
Medtr2g103730 1.0kb downstream 1.0kb downstream 6071 true chr2: 44659285-44665355 Medicago truncatula
Medtr2g103730 1.0kb downstream 1.0kb downstream 1000 false chr2: 44664356-44665355 Medicago truncatula
Medtr2g103730 2.0kb upstream 2.0kb upstream 7071 true chr2: 44657285-44664355 Medicago truncatula
Medtr2g103730 2.0kb upstream 2.0kb upstream 2000 false chr2: 44657285-44659284 Medicago truncatula
Medtr2g103730 2.0kb downstream 2.0kb downstream 7071 true chr2: 44659285-44666355 Medicago truncatula
Medtr2g103730 2.0kb downstream 2.0kb downstream 2000 false chr2: 44664356-44666355 Medicago truncatula
Medtr2g103730 5.0kb upstream 5.0kb upstream 10071 true chr2: 44654285-44664355 Medicago truncatula
Medtr2g103730 5.0kb upstream 5.0kb upstream 5000 false chr2: 44654285-44659284 Medicago truncatula
Medtr2g103730 5.0kb downstream 5.0kb downstream 10071 true chr2: 44659285-44669355 Medicago truncatula
Medtr2g103730 5.0kb downstream 5.0kb downstream 5000 false chr2: 44664356-44669355 Medicago truncatula
Medtr2g103730 10.0kb upstream 10.0kb upstream 15071 true chr2: 44649285-44664355 Medicago truncatula
Medtr2g103730 10.0kb upstream 10.0kb upstream 10000 false chr2: 44649285-44659284 Medicago truncatula
Medtr2g103730 10.0kb downstream 10.0kb downstream 15071 true chr2: 44659285-44674355 Medicago truncatula
Medtr2g103730 10.0kb downstream 10.0kb downstream 10000 false chr2: 44664356-44674355 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309181 5265 Fabidae View MSA
124060691 5270 Rosid View MSA
123737706 5271 Pentapetalae View MSA
122793552 5272 Eudicot View MSA
122046081 5273 Angiosperm View MSA
121348211 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.227     High Low
cufflinks 55.799     High  
cufflinks 42.402     High  
cufflinks 23.409     High  
cufflinks 53.702     High  
cufflinks 14.755     High Low
cufflinks 49.145     High  
cufflinks 45.097     High  
cufflinks 65.63     High High

0 Strain