Gene : Medtr2g103500 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF01918 - Alba (Alba) Description:  alba DNA/RNA-binding protein
Genomic Order:  5694 Name:  ? Medtr2g103500
Secondary Identifier:  ? PAC:31065357
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g103500 0.5kb upstream 0.5kb upstream 2833 true chr2: 44559023-44561855 Medicago truncatula
Medtr2g103500 0.5kb upstream 0.5kb upstream 500 false chr2: 44559023-44559522 Medicago truncatula
Medtr2g103500 0.5kb downstream 0.5kb downstream 2833 true chr2: 44559523-44562355 Medicago truncatula
Medtr2g103500 0.5kb downstream 0.5kb downstream 500 false chr2: 44561856-44562355 Medicago truncatula
Medtr2g103500 1.0kb upstream 1.0kb upstream 3333 true chr2: 44558523-44561855 Medicago truncatula
Medtr2g103500 1.0kb upstream 1.0kb upstream 1000 false chr2: 44558523-44559522 Medicago truncatula
Medtr2g103500 1.0kb downstream 1.0kb downstream 3333 true chr2: 44559523-44562855 Medicago truncatula
Medtr2g103500 1.0kb downstream 1.0kb downstream 1000 false chr2: 44561856-44562855 Medicago truncatula
Medtr2g103500 2.0kb upstream 2.0kb upstream 4333 true chr2: 44557523-44561855 Medicago truncatula
Medtr2g103500 2.0kb upstream 2.0kb upstream 2000 false chr2: 44557523-44559522 Medicago truncatula
Medtr2g103500 2.0kb downstream 2.0kb downstream 4333 true chr2: 44559523-44563855 Medicago truncatula
Medtr2g103500 2.0kb downstream 2.0kb downstream 2000 false chr2: 44561856-44563855 Medicago truncatula
Medtr2g103500 5.0kb upstream 5.0kb upstream 7333 true chr2: 44554523-44561855 Medicago truncatula
Medtr2g103500 5.0kb upstream 5.0kb upstream 5000 false chr2: 44554523-44559522 Medicago truncatula
Medtr2g103500 5.0kb downstream 5.0kb downstream 7333 true chr2: 44559523-44566855 Medicago truncatula
Medtr2g103500 5.0kb downstream 5.0kb downstream 5000 false chr2: 44561856-44566855 Medicago truncatula
Medtr2g103500 10.0kb upstream 10.0kb upstream 12333 true chr2: 44549523-44561855 Medicago truncatula
Medtr2g103500 10.0kb upstream 10.0kb upstream 10000 false chr2: 44549523-44559522 Medicago truncatula
Medtr2g103500 10.0kb downstream 10.0kb downstream 12333 true chr2: 44559523-44571855 Medicago truncatula
Medtr2g103500 10.0kb downstream 10.0kb downstream 10000 false chr2: 44561856-44571855 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310195 5265 Fabidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.733        
cufflinks 5.425        
cufflinks 5.484        
cufflinks 0.989       Low
cufflinks 6.94       High
cufflinks 0.613       Low
cufflinks 3.424        
cufflinks 5.163        
cufflinks 2.142        

0 Strain