Gene : Medtr2g104440 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11193 - SMALL NUCLEAR RIBONUCLEOPROTEIN E Description:  small nuclear ribonucleoprotein
Genomic Order:  5770 Name:  ? Medtr2g104440
Secondary Identifier:  ? PAC:31069116
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g104440 0.5kb upstream 0.5kb upstream 2644 true chr2: 44987645-44990288 Medicago truncatula
Medtr2g104440 0.5kb upstream 0.5kb upstream 500 false chr2: 44987645-44988144 Medicago truncatula
Medtr2g104440 0.5kb downstream 0.5kb downstream 2644 true chr2: 44988145-44990788 Medicago truncatula
Medtr2g104440 0.5kb downstream 0.5kb downstream 500 false chr2: 44990289-44990788 Medicago truncatula
Medtr2g104440 1.0kb upstream 1.0kb upstream 3144 true chr2: 44987145-44990288 Medicago truncatula
Medtr2g104440 1.0kb upstream 1.0kb upstream 1000 false chr2: 44987145-44988144 Medicago truncatula
Medtr2g104440 1.0kb downstream 1.0kb downstream 3144 true chr2: 44988145-44991288 Medicago truncatula
Medtr2g104440 1.0kb downstream 1.0kb downstream 1000 false chr2: 44990289-44991288 Medicago truncatula
Medtr2g104440 2.0kb upstream 2.0kb upstream 4144 true chr2: 44986145-44990288 Medicago truncatula
Medtr2g104440 2.0kb upstream 2.0kb upstream 2000 false chr2: 44986145-44988144 Medicago truncatula
Medtr2g104440 2.0kb downstream 2.0kb downstream 4144 true chr2: 44988145-44992288 Medicago truncatula
Medtr2g104440 2.0kb downstream 2.0kb downstream 2000 false chr2: 44990289-44992288 Medicago truncatula
Medtr2g104440 5.0kb upstream 5.0kb upstream 7144 true chr2: 44983145-44990288 Medicago truncatula
Medtr2g104440 5.0kb upstream 5.0kb upstream 5000 false chr2: 44983145-44988144 Medicago truncatula
Medtr2g104440 5.0kb downstream 5.0kb downstream 7144 true chr2: 44988145-44995288 Medicago truncatula
Medtr2g104440 5.0kb downstream 5.0kb downstream 5000 false chr2: 44990289-44995288 Medicago truncatula
Medtr2g104440 10.0kb upstream 10.0kb upstream 12144 true chr2: 44978145-44990288 Medicago truncatula
Medtr2g104440 10.0kb upstream 10.0kb upstream 10000 false chr2: 44978145-44988144 Medicago truncatula
Medtr2g104440 10.0kb downstream 10.0kb downstream 12144 true chr2: 44988145-45000288 Medicago truncatula
Medtr2g104440 10.0kb downstream 10.0kb downstream 10000 false chr2: 44990289-45000288 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314944 5265 Fabidae View MSA
124065170 5270 Rosid View MSA
123753789 5271 Pentapetalae View MSA
122788242 5272 Eudicot View MSA
122042193 5273 Angiosperm View MSA
121347325 5274 Embryophyte View MSA
123424375 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.142     High  
cufflinks 7.384       Low
cufflinks 9.591        
cufflinks 24.891     High High
cufflinks 11.308     High  
cufflinks 24.577     High High
cufflinks 18.786     High  
cufflinks 7.407       Low
cufflinks 26.258     High High

0 Strain