Gene : Medtr2g105670 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Description:  zinc ion-binding protein
Genomic Order:  5847 Name:  ? Medtr2g105670
Secondary Identifier:  ? PAC:31067979
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g105670 0.5kb upstream 0.5kb upstream 2064 true chr2: 45555830-45557893 Medicago truncatula
Medtr2g105670 0.5kb upstream 0.5kb upstream 500 false chr2: 45557394-45557893 Medicago truncatula
Medtr2g105670 0.5kb downstream 0.5kb downstream 2064 true chr2: 45555330-45557393 Medicago truncatula
Medtr2g105670 0.5kb downstream 0.5kb downstream 500 false chr2: 45555330-45555829 Medicago truncatula
Medtr2g105670 1.0kb upstream 1.0kb upstream 2564 true chr2: 45555830-45558393 Medicago truncatula
Medtr2g105670 1.0kb upstream 1.0kb upstream 1000 false chr2: 45557394-45558393 Medicago truncatula
Medtr2g105670 1.0kb downstream 1.0kb downstream 2564 true chr2: 45554830-45557393 Medicago truncatula
Medtr2g105670 1.0kb downstream 1.0kb downstream 1000 false chr2: 45554830-45555829 Medicago truncatula
Medtr2g105670 2.0kb upstream 2.0kb upstream 3564 true chr2: 45555830-45559393 Medicago truncatula
Medtr2g105670 2.0kb upstream 2.0kb upstream 2000 false chr2: 45557394-45559393 Medicago truncatula
Medtr2g105670 2.0kb downstream 2.0kb downstream 3564 true chr2: 45553830-45557393 Medicago truncatula
Medtr2g105670 2.0kb downstream 2.0kb downstream 2000 false chr2: 45553830-45555829 Medicago truncatula
Medtr2g105670 5.0kb upstream 5.0kb upstream 6564 true chr2: 45555830-45562393 Medicago truncatula
Medtr2g105670 5.0kb upstream 5.0kb upstream 5000 false chr2: 45557394-45562393 Medicago truncatula
Medtr2g105670 5.0kb downstream 5.0kb downstream 6564 true chr2: 45550830-45557393 Medicago truncatula
Medtr2g105670 5.0kb downstream 5.0kb downstream 5000 false chr2: 45550830-45555829 Medicago truncatula
Medtr2g105670 10.0kb upstream 10.0kb upstream 11564 true chr2: 45555830-45567393 Medicago truncatula
Medtr2g105670 10.0kb upstream 10.0kb upstream 10000 false chr2: 45557394-45567393 Medicago truncatula
Medtr2g105670 10.0kb downstream 10.0kb downstream 11564 true chr2: 45545830-45557393 Medicago truncatula
Medtr2g105670 10.0kb downstream 10.0kb downstream 10000 false chr2: 45545830-45555829 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122258921 5265 Fabidae Singleton cluster - no MSA
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.234        
cufflinks 0.616       High
cufflinks 0.178       Low
cufflinks 0.195        
cufflinks 0.212        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.4        
cufflinks 0.315        
cufflinks 0.283        

0 Strain