Gene : Medtr2g436620 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Description:  translationally-controlled tumor-like protein
Genomic Order:  1977 Name:  ? Medtr2g436620
Secondary Identifier:  ? PAC:31066030
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g436620 0.5kb upstream 0.5kb upstream 2712 true chr2: 14244272-14246983 Medicago truncatula
Medtr2g436620 0.5kb upstream 0.5kb upstream 500 false chr2: 14244272-14244771 Medicago truncatula
Medtr2g436620 0.5kb downstream 0.5kb downstream 2712 true chr2: 14244772-14247483 Medicago truncatula
Medtr2g436620 0.5kb downstream 0.5kb downstream 500 false chr2: 14246984-14247483 Medicago truncatula
Medtr2g436620 1.0kb upstream 1.0kb upstream 3212 true chr2: 14243772-14246983 Medicago truncatula
Medtr2g436620 1.0kb upstream 1.0kb upstream 1000 false chr2: 14243772-14244771 Medicago truncatula
Medtr2g436620 1.0kb downstream 1.0kb downstream 3212 true chr2: 14244772-14247983 Medicago truncatula
Medtr2g436620 1.0kb downstream 1.0kb downstream 1000 false chr2: 14246984-14247983 Medicago truncatula
Medtr2g436620 2.0kb upstream 2.0kb upstream 4212 true chr2: 14242772-14246983 Medicago truncatula
Medtr2g436620 2.0kb upstream 2.0kb upstream 2000 false chr2: 14242772-14244771 Medicago truncatula
Medtr2g436620 2.0kb downstream 2.0kb downstream 4212 true chr2: 14244772-14248983 Medicago truncatula
Medtr2g436620 2.0kb downstream 2.0kb downstream 2000 false chr2: 14246984-14248983 Medicago truncatula
Medtr2g436620 5.0kb upstream 5.0kb upstream 7212 true chr2: 14239772-14246983 Medicago truncatula
Medtr2g436620 5.0kb upstream 5.0kb upstream 5000 false chr2: 14239772-14244771 Medicago truncatula
Medtr2g436620 5.0kb downstream 5.0kb downstream 7212 true chr2: 14244772-14251983 Medicago truncatula
Medtr2g436620 5.0kb downstream 5.0kb downstream 5000 false chr2: 14246984-14251983 Medicago truncatula
Medtr2g436620 10.0kb upstream 10.0kb upstream 12212 true chr2: 14234772-14246983 Medicago truncatula
Medtr2g436620 10.0kb upstream 10.0kb upstream 10000 false chr2: 14234772-14244771 Medicago truncatula
Medtr2g436620 10.0kb downstream 10.0kb downstream 12212 true chr2: 14244772-14256983 Medicago truncatula
Medtr2g436620 10.0kb downstream 10.0kb downstream 10000 false chr2: 14246984-14256983 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297933 5265 Fabidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 389.216     High  
cufflinks 198.478     High Low
cufflinks 251.47     High  
cufflinks 717.01     High High
cufflinks 227.24     High  
cufflinks 557.306     High  
cufflinks 599.668     High  
cufflinks 180.775     High Low
cufflinks 622.729     High  

0 Strain