Gene : Medtr2g098660 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG1921 - Endonuclease III Description:  EndoIII-related endonuclease
Genomic Order:  5363 Name:  ? Medtr2g098660
Secondary Identifier:  ? PAC:31066893
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g098660 0.5kb upstream 0.5kb upstream 3833 true chr2: 42232156-42235988 Medicago truncatula
Medtr2g098660 0.5kb upstream 0.5kb upstream 500 false chr2: 42235489-42235988 Medicago truncatula
Medtr2g098660 0.5kb downstream 0.5kb downstream 3833 true chr2: 42231656-42235488 Medicago truncatula
Medtr2g098660 0.5kb downstream 0.5kb downstream 500 false chr2: 42231656-42232155 Medicago truncatula
Medtr2g098660 1.0kb upstream 1.0kb upstream 4333 true chr2: 42232156-42236488 Medicago truncatula
Medtr2g098660 1.0kb upstream 1.0kb upstream 1000 false chr2: 42235489-42236488 Medicago truncatula
Medtr2g098660 1.0kb downstream 1.0kb downstream 4333 true chr2: 42231156-42235488 Medicago truncatula
Medtr2g098660 1.0kb downstream 1.0kb downstream 1000 false chr2: 42231156-42232155 Medicago truncatula
Medtr2g098660 2.0kb upstream 2.0kb upstream 5333 true chr2: 42232156-42237488 Medicago truncatula
Medtr2g098660 2.0kb upstream 2.0kb upstream 2000 false chr2: 42235489-42237488 Medicago truncatula
Medtr2g098660 2.0kb downstream 2.0kb downstream 5333 true chr2: 42230156-42235488 Medicago truncatula
Medtr2g098660 2.0kb downstream 2.0kb downstream 2000 false chr2: 42230156-42232155 Medicago truncatula
Medtr2g098660 5.0kb upstream 5.0kb upstream 8333 true chr2: 42232156-42240488 Medicago truncatula
Medtr2g098660 5.0kb upstream 5.0kb upstream 5000 false chr2: 42235489-42240488 Medicago truncatula
Medtr2g098660 5.0kb downstream 5.0kb downstream 8333 true chr2: 42227156-42235488 Medicago truncatula
Medtr2g098660 5.0kb downstream 5.0kb downstream 5000 false chr2: 42227156-42232155 Medicago truncatula
Medtr2g098660 10.0kb upstream 10.0kb upstream 13333 true chr2: 42232156-42245488 Medicago truncatula
Medtr2g098660 10.0kb upstream 10.0kb upstream 10000 false chr2: 42235489-42245488 Medicago truncatula
Medtr2g098660 10.0kb downstream 10.0kb downstream 13333 true chr2: 42222156-42235488 Medicago truncatula
Medtr2g098660 10.0kb downstream 10.0kb downstream 10000 false chr2: 42222156-42232155 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041361 5273 Angiosperm View MSA
122296840 5265 Fabidae View MSA
124060814 5270 Rosid View MSA
123745543 5271 Pentapetalae View MSA
122791789 5272 Eudicot View MSA
121344873 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245        
cufflinks 1.156        
cufflinks 1.164        
cufflinks 0.064     Low Low
cufflinks 1.617       High
cufflinks 0.037     Low Low
cufflinks 0.158        
cufflinks 0.95        
cufflinks 0.247        

0 Strain