Gene : Medtr2g100510 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Description:  IAA-amino acid hydrolase ILR1-like protein
Genomic Order:  5501 Name:  ? Medtr2g100510
Secondary Identifier:  ? PAC:31062890
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g100510 0.5kb upstream 0.5kb upstream 5226 true chr2: 43202107-43207332 Medicago truncatula
Medtr2g100510 0.5kb upstream 0.5kb upstream 500 false chr2: 43206833-43207332 Medicago truncatula
Medtr2g100510 0.5kb downstream 0.5kb downstream 5226 true chr2: 43201607-43206832 Medicago truncatula
Medtr2g100510 0.5kb downstream 0.5kb downstream 500 false chr2: 43201607-43202106 Medicago truncatula
Medtr2g100510 1.0kb upstream 1.0kb upstream 5726 true chr2: 43202107-43207832 Medicago truncatula
Medtr2g100510 1.0kb upstream 1.0kb upstream 1000 false chr2: 43206833-43207832 Medicago truncatula
Medtr2g100510 1.0kb downstream 1.0kb downstream 5726 true chr2: 43201107-43206832 Medicago truncatula
Medtr2g100510 1.0kb downstream 1.0kb downstream 1000 false chr2: 43201107-43202106 Medicago truncatula
Medtr2g100510 2.0kb upstream 2.0kb upstream 6726 true chr2: 43202107-43208832 Medicago truncatula
Medtr2g100510 2.0kb upstream 2.0kb upstream 2000 false chr2: 43206833-43208832 Medicago truncatula
Medtr2g100510 2.0kb downstream 2.0kb downstream 6726 true chr2: 43200107-43206832 Medicago truncatula
Medtr2g100510 2.0kb downstream 2.0kb downstream 2000 false chr2: 43200107-43202106 Medicago truncatula
Medtr2g100510 5.0kb upstream 5.0kb upstream 9726 true chr2: 43202107-43211832 Medicago truncatula
Medtr2g100510 5.0kb upstream 5.0kb upstream 5000 false chr2: 43206833-43211832 Medicago truncatula
Medtr2g100510 5.0kb downstream 5.0kb downstream 9726 true chr2: 43197107-43206832 Medicago truncatula
Medtr2g100510 5.0kb downstream 5.0kb downstream 5000 false chr2: 43197107-43202106 Medicago truncatula
Medtr2g100510 10.0kb upstream 10.0kb upstream 14726 true chr2: 43202107-43216832 Medicago truncatula
Medtr2g100510 10.0kb upstream 10.0kb upstream 10000 false chr2: 43206833-43216832 Medicago truncatula
Medtr2g100510 10.0kb downstream 10.0kb downstream 14726 true chr2: 43192107-43206832 Medicago truncatula
Medtr2g100510 10.0kb downstream 10.0kb downstream 10000 false chr2: 43192107-43202106 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305039 5265 Fabidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.13       Low
cufflinks 9.456     High  
cufflinks 10.143     High  
cufflinks 17.418     High High
cufflinks 8.875        
cufflinks 8.831        
cufflinks 14.32     High  
cufflinks 8.802        
cufflinks 14.525     High  

0 Strain