Gene : Medtr2g100410 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10544 - 60S RIBOSOMAL PROTEIN L28 Description:  60S ribosomal L28-like protein
Genomic Order:  5492 Name:  ? Medtr2g100410
Secondary Identifier:  ? PAC:31062448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g100410 0.5kb upstream 0.5kb upstream 3839 true chr2: 43146376-43150214 Medicago truncatula
Medtr2g100410 0.5kb upstream 0.5kb upstream 500 false chr2: 43146376-43146875 Medicago truncatula
Medtr2g100410 0.5kb downstream 0.5kb downstream 3839 true chr2: 43146876-43150714 Medicago truncatula
Medtr2g100410 0.5kb downstream 0.5kb downstream 500 false chr2: 43150215-43150714 Medicago truncatula
Medtr2g100410 1.0kb upstream 1.0kb upstream 4339 true chr2: 43145876-43150214 Medicago truncatula
Medtr2g100410 1.0kb upstream 1.0kb upstream 1000 false chr2: 43145876-43146875 Medicago truncatula
Medtr2g100410 1.0kb downstream 1.0kb downstream 4339 true chr2: 43146876-43151214 Medicago truncatula
Medtr2g100410 1.0kb downstream 1.0kb downstream 1000 false chr2: 43150215-43151214 Medicago truncatula
Medtr2g100410 2.0kb upstream 2.0kb upstream 5339 true chr2: 43144876-43150214 Medicago truncatula
Medtr2g100410 2.0kb upstream 2.0kb upstream 2000 false chr2: 43144876-43146875 Medicago truncatula
Medtr2g100410 2.0kb downstream 2.0kb downstream 5339 true chr2: 43146876-43152214 Medicago truncatula
Medtr2g100410 2.0kb downstream 2.0kb downstream 2000 false chr2: 43150215-43152214 Medicago truncatula
Medtr2g100410 5.0kb upstream 5.0kb upstream 8339 true chr2: 43141876-43150214 Medicago truncatula
Medtr2g100410 5.0kb upstream 5.0kb upstream 5000 false chr2: 43141876-43146875 Medicago truncatula
Medtr2g100410 5.0kb downstream 5.0kb downstream 8339 true chr2: 43146876-43155214 Medicago truncatula
Medtr2g100410 5.0kb downstream 5.0kb downstream 5000 false chr2: 43150215-43155214 Medicago truncatula
Medtr2g100410 10.0kb upstream 10.0kb upstream 13339 true chr2: 43136876-43150214 Medicago truncatula
Medtr2g100410 10.0kb upstream 10.0kb upstream 10000 false chr2: 43136876-43146875 Medicago truncatula
Medtr2g100410 10.0kb downstream 10.0kb downstream 13339 true chr2: 43146876-43160214 Medicago truncatula
Medtr2g100410 10.0kb downstream 10.0kb downstream 10000 false chr2: 43150215-43160214 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314116 5265 Fabidae View MSA
124072895 5270 Rosid View MSA
123746197 5271 Pentapetalae View MSA
122786933 5272 Eudicot View MSA
122049250 5273 Angiosperm View MSA
121348923 5274 Embryophyte View MSA
123424789 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.153     High Low
cufflinks 57.367     High  
cufflinks 57.256     High  
cufflinks 39.067     High Low
cufflinks 95.676     High High
cufflinks 34.395     High Low
cufflinks 69.443     High  
cufflinks 71.77     High  
cufflinks 76.597     High  

0 Strain