Gene : Medtr2g101320 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24177:SF18 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Description:  ankyrin repeat plant-like protein
Genomic Order:  5542 Name:  ? Medtr2g101320
Secondary Identifier:  ? PAC:31067205
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g101320 0.5kb upstream 0.5kb upstream 3310 true chr2: 43552536-43555845 Medicago truncatula
Medtr2g101320 0.5kb upstream 0.5kb upstream 500 false chr2: 43555346-43555845 Medicago truncatula
Medtr2g101320 0.5kb downstream 0.5kb downstream 3310 true chr2: 43552036-43555345 Medicago truncatula
Medtr2g101320 0.5kb downstream 0.5kb downstream 500 false chr2: 43552036-43552535 Medicago truncatula
Medtr2g101320 1.0kb upstream 1.0kb upstream 3810 true chr2: 43552536-43556345 Medicago truncatula
Medtr2g101320 1.0kb upstream 1.0kb upstream 1000 false chr2: 43555346-43556345 Medicago truncatula
Medtr2g101320 1.0kb downstream 1.0kb downstream 3810 true chr2: 43551536-43555345 Medicago truncatula
Medtr2g101320 1.0kb downstream 1.0kb downstream 1000 false chr2: 43551536-43552535 Medicago truncatula
Medtr2g101320 2.0kb upstream 2.0kb upstream 4810 true chr2: 43552536-43557345 Medicago truncatula
Medtr2g101320 2.0kb upstream 2.0kb upstream 2000 false chr2: 43555346-43557345 Medicago truncatula
Medtr2g101320 2.0kb downstream 2.0kb downstream 4810 true chr2: 43550536-43555345 Medicago truncatula
Medtr2g101320 2.0kb downstream 2.0kb downstream 2000 false chr2: 43550536-43552535 Medicago truncatula
Medtr2g101320 5.0kb upstream 5.0kb upstream 7810 true chr2: 43552536-43560345 Medicago truncatula
Medtr2g101320 5.0kb upstream 5.0kb upstream 5000 false chr2: 43555346-43560345 Medicago truncatula
Medtr2g101320 5.0kb downstream 5.0kb downstream 7810 true chr2: 43547536-43555345 Medicago truncatula
Medtr2g101320 5.0kb downstream 5.0kb downstream 5000 false chr2: 43547536-43552535 Medicago truncatula
Medtr2g101320 10.0kb upstream 10.0kb upstream 12810 true chr2: 43552536-43565345 Medicago truncatula
Medtr2g101320 10.0kb upstream 10.0kb upstream 10000 false chr2: 43555346-43565345 Medicago truncatula
Medtr2g101320 10.0kb downstream 10.0kb downstream 12810 true chr2: 43542536-43555345 Medicago truncatula
Medtr2g101320 10.0kb downstream 10.0kb downstream 10000 false chr2: 43542536-43552535 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299853 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.069        
cufflinks 0.246        
cufflinks 0.019     Low Low
cufflinks 0.016     Low Low
cufflinks 0.293       High
cufflinks 0.022     Low Low
cufflinks 0.19        
cufflinks 0.13        
cufflinks 0.15        

0 Strain