Gene : Medtr2g091110 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0962 - DNA repair protein RAD50, ABC-type ATPase/SMC superfamily Description:  frigida-LIKE protein
Genomic Order:  4969 Name:  ? Medtr2g091110
Secondary Identifier:  ? PAC:31068181
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g091110 0.5kb upstream 0.5kb upstream 6167 true chr2: 39218998-39225164 Medicago truncatula
Medtr2g091110 0.5kb upstream 0.5kb upstream 500 false chr2: 39218998-39219497 Medicago truncatula
Medtr2g091110 0.5kb downstream 0.5kb downstream 6167 true chr2: 39219498-39225664 Medicago truncatula
Medtr2g091110 0.5kb downstream 0.5kb downstream 500 false chr2: 39225165-39225664 Medicago truncatula
Medtr2g091110 1.0kb upstream 1.0kb upstream 6667 true chr2: 39218498-39225164 Medicago truncatula
Medtr2g091110 1.0kb upstream 1.0kb upstream 1000 false chr2: 39218498-39219497 Medicago truncatula
Medtr2g091110 1.0kb downstream 1.0kb downstream 6667 true chr2: 39219498-39226164 Medicago truncatula
Medtr2g091110 1.0kb downstream 1.0kb downstream 1000 false chr2: 39225165-39226164 Medicago truncatula
Medtr2g091110 2.0kb upstream 2.0kb upstream 7667 true chr2: 39217498-39225164 Medicago truncatula
Medtr2g091110 2.0kb upstream 2.0kb upstream 2000 false chr2: 39217498-39219497 Medicago truncatula
Medtr2g091110 2.0kb downstream 2.0kb downstream 7667 true chr2: 39219498-39227164 Medicago truncatula
Medtr2g091110 2.0kb downstream 2.0kb downstream 2000 false chr2: 39225165-39227164 Medicago truncatula
Medtr2g091110 5.0kb upstream 5.0kb upstream 10667 true chr2: 39214498-39225164 Medicago truncatula
Medtr2g091110 5.0kb upstream 5.0kb upstream 5000 false chr2: 39214498-39219497 Medicago truncatula
Medtr2g091110 5.0kb downstream 5.0kb downstream 10667 true chr2: 39219498-39230164 Medicago truncatula
Medtr2g091110 5.0kb downstream 5.0kb downstream 5000 false chr2: 39225165-39230164 Medicago truncatula
Medtr2g091110 10.0kb upstream 10.0kb upstream 15667 true chr2: 39209498-39225164 Medicago truncatula
Medtr2g091110 10.0kb upstream 10.0kb upstream 10000 false chr2: 39209498-39219497 Medicago truncatula
Medtr2g091110 10.0kb downstream 10.0kb downstream 15667 true chr2: 39219498-39235164 Medicago truncatula
Medtr2g091110 10.0kb downstream 10.0kb downstream 10000 false chr2: 39225165-39235164 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169        
cufflinks 0.716        
cufflinks 0.776        
cufflinks 0.008     Low Low
cufflinks 1.625       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.749        
cufflinks 0.018     Low  

0 Strain