Gene : Medtr2g091105 M. truncatula Mt4.0v1
Defline:  (1 of 42) PF07899 - Frigida-like protein (Frigida) Description:  frigida-LIKE protein
Genomic Order:  4968 Name:  ? Medtr2g091105
Secondary Identifier:  ? PAC:31068243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g091105 0.5kb upstream 0.5kb upstream 3903 true chr2: 39214001-39217903 Medicago truncatula
Medtr2g091105 0.5kb upstream 0.5kb upstream 500 false chr2: 39214001-39214500 Medicago truncatula
Medtr2g091105 0.5kb downstream 0.5kb downstream 3903 true chr2: 39214501-39218403 Medicago truncatula
Medtr2g091105 0.5kb downstream 0.5kb downstream 500 false chr2: 39217904-39218403 Medicago truncatula
Medtr2g091105 1.0kb upstream 1.0kb upstream 4403 true chr2: 39213501-39217903 Medicago truncatula
Medtr2g091105 1.0kb upstream 1.0kb upstream 1000 false chr2: 39213501-39214500 Medicago truncatula
Medtr2g091105 1.0kb downstream 1.0kb downstream 4403 true chr2: 39214501-39218903 Medicago truncatula
Medtr2g091105 1.0kb downstream 1.0kb downstream 1000 false chr2: 39217904-39218903 Medicago truncatula
Medtr2g091105 2.0kb upstream 2.0kb upstream 5403 true chr2: 39212501-39217903 Medicago truncatula
Medtr2g091105 2.0kb upstream 2.0kb upstream 2000 false chr2: 39212501-39214500 Medicago truncatula
Medtr2g091105 2.0kb downstream 2.0kb downstream 5403 true chr2: 39214501-39219903 Medicago truncatula
Medtr2g091105 2.0kb downstream 2.0kb downstream 2000 false chr2: 39217904-39219903 Medicago truncatula
Medtr2g091105 5.0kb upstream 5.0kb upstream 8403 true chr2: 39209501-39217903 Medicago truncatula
Medtr2g091105 5.0kb upstream 5.0kb upstream 5000 false chr2: 39209501-39214500 Medicago truncatula
Medtr2g091105 5.0kb downstream 5.0kb downstream 8403 true chr2: 39214501-39222903 Medicago truncatula
Medtr2g091105 5.0kb downstream 5.0kb downstream 5000 false chr2: 39217904-39222903 Medicago truncatula
Medtr2g091105 10.0kb upstream 10.0kb upstream 13403 true chr2: 39204501-39217903 Medicago truncatula
Medtr2g091105 10.0kb upstream 10.0kb upstream 10000 false chr2: 39204501-39214500 Medicago truncatula
Medtr2g091105 10.0kb downstream 10.0kb downstream 13403 true chr2: 39214501-39227903 Medicago truncatula
Medtr2g091105 10.0kb downstream 10.0kb downstream 10000 false chr2: 39217904-39227903 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 0.171        
cufflinks 0.14        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.279        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.109        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain